Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0928 ATGGCACTCTCGTTCTCACTCTCTTCAAGCGTAACTGTTTCTAACCGTTTTCCTTCTTGTTGCATTTCGAAACTGAATGGTAAGAGTTGTAATGGGTTTAATAAAGTGGTATGTTCGTCACGGAAGGATAAGAATCCGTTAATTGGAATTGGTTTGGGGTTTGTAACGGCTATGGTTACGGGATTAACGGCGTTAAATGCTGATGCAACGAGAATTGAATACTATGCTACTGTAGCAGAGCCAAAGTGTGAGCTTAATTATGCTAAGTCTGGGCTTGGTTATTGTGATGCTGTTGAGGGTTTTGGTGATGAAGCTCCTCTTGGAGAGCTTATTATTATTCATTATACTGCGAGATTCGACGACGGGATTGTATTTGATAGTAGTTATAAACGTGGAAGACCGCTCACTATGCGTATTGGGGTTGGTAAGGTAATTAAGGGATTGGATCAGGGGATTTTGGGGGGTGAAGGAGTACCTCCGATGCGGATAGGTGGGAAACGTCAGCTATTGATTCCTCCATTGTTAGCATATGGCCCTGAACCTGCAGGATGCTTCTCAGGTGACTGCAATATACCGGGCAATGCCACTCTTCTGTATGATATTAAATTTGTTGGTCTTTATACGGATGAACAACACATGGATTGA 645 0.4264 MALSFSLSSSVTVSNRFPSCCISKLNGKSCNGFNKVVCSSRKDKNPLIGIGLGFVTAMVTGLTALNADATRIEYYATVAEPKCELNYAKSGLGYCDAVEGFGDEAPLGELIIIHYTARFDDGIVFDSSYKRGRPLTMRIGVGKVIKGLDQGILGGEGVPPMRIGGKRQLLIPPLLAYGPEPAGCFSGDCNIPGNATLLYDIKFVGLYTDEQHMD* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0928 214 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 25 209 IPR044183 GO:0009507
Tpr3g0928 214 Gene3D - 80 206 IPR046357 GO:0003755
Tpr3g0928 214 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 108 207 IPR001179 GO:0003755
Tpr3g0928 214 SUPERFAMILY FKBP-like 87 205 - -
Tpr3g0928 214 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 105 203 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0928 Tpr-Chr3 8591383 8593854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0928 84 208 Calmodulin-binding Proteins AT5G48570 35.714 2.95e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0928 K01802 - gmx:100500547 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0928 3 8591383 8593854 Tpr3g0928 3 8591383 8593854 ECH