Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0926 ATGAAGATGGGATTGAGAGATCGTAGTAGCAGCATGGAGGATCCAGATGGGACATTAGCTAGTGTTGCCCAATGCATTGAGCAGCTGCGCCAGAGCTCGTCTTCTGTGCACGAGAAAGAGTATTCCTTAAGGCAGTTAATGGATCTTATAGATATGCGTGAAAATGCATTTAGTGCTGTTGGATCTCACTCTCAGGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCAGGTTCGTTGAATGTGAAGATCCAGGCAGCAACTGTTTTGGGCTCACTTTGCAAAGAAAATGAACTGAGAGTAAAAGTTTTACTTGGTGGATGTATTCCTCCATTGCTTGGTCTGCTTAAGTCAAGTTCTACTGAAGGTCAAATTGCTGCTGCAAAAACTATATATGCTGTCTCTCAAGGTGGGGTGAAAGATCATGTTGGTTCCAAAATATTTTCAACCGAAGGAGTAGTACCTGTGCTTTGGGAGCAGTTGCGAACTGGTCTGAAAGCCGGAAACGTAGTTGAAAGTTTACTGACGGGAACATTGAAAAATCTCTCCAGCAATGCTGAGGGATTCTGGAATGCAACAATTCAAGCTGGAGGAGTGGACATATTAGTGAAGTTATTGGCAACAGGACAGCCTAGCACTTTAGCCAATGTTTGCTTTTTGCTTGCTGCTGTAATGATGGAGGATGCATCTGTTTGTTCAAAGGTGTTGAATGCAGAGGTGACTAAACAACTCTTGAAACTATTAGGCCCTGGTAATGATGACCTCGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTATCTGCTCAATGCAAAGAGGCGAGGCGGGAAATAGCCAGTTCTAATGGCATTCCTGCTTTGATCAATGCTACTATAGCTCCTTCTAAAGAGTACATGCAAGGTGAGTGTGCTCAAGCATTACAAGAGAATGCTATGTGTGCTTTGGCAAACATCTCTGGTGGTTTGTCTTATGTCATATCTAGCCTCGGTCAAAGCCTTGAATCATGCTCTTCCTCTACCCAAATTGCCGACACTTTAGGAGCTATAGCATCAGCTCTTATGATATATGATAACAAGGCAGAAACTACCAAACCATCAGATCCTTTGGTGGTTGAACAGACATTAATGAAGCAATTCAAACCTCGCTTGCCCTTCCTTGTGCAAGAACGGACCATTGAAGCTCTAGCTAGTTTGTACGGCAATCCCATACTCTCTGCTAAACTAGCAAATTCTGATGCAAAACATTTGCTTGTTGGTTTGATAACAATGGCAGCCAATGAAGTGCAAGATGAGCTTATAAAAGCTCTGTTGACACTATGCAAAAGTGAAGGCAGCCTATGGCGCGCACTTCAGGGCCGTGATGGAGTTCAGCTATTGATATCTCTTCTTGGTCTTTCATCAGAACAGCAGCAAGAATGTGCAGTTGCCTTGCTTTGCCTTTTATCAAATGAAAATGATGAAAGTAAATGGGCAATTACCGCTGCTGGTGGTATACCTCCACTTGTTCAAATTTTAGAAACAGGATCTGCAAAAGCAAAGGAAGATTCGGCAAGAATCCTTAAGAACTTGTGCAATCATAGTGAAGATATACGTGCTTGCGTTGAAAGTGCAGATGCTGTTCCTGCGTTGTTGTGGCTATTGAAGAATGGAAGTCCTAATGGGAAGGATATTGCAGCAAAGACCATAAATCATTTAATTCATAAATCTGATACTACGACTATCAGTCAGCTTACAGCGTTATTGACAAGTGACCTTCCTGATTCTAAGGTATATGTTTTGGATGCTTTGAGAAGTATGCTTTGTGTTGCTCCGCTTAGCGACATTTTACGTGAAGGCAGTGCTGCTGGTGATGCATTTGATACTGTGATAATGTTATTGAGCTCTACTAAGGAAGAAACTCAGGCAAAAGCTGCGTCAGCTCTGGCCGAAATTTTTGAAGCAAGGAAAGATTTGCGTGAAAGTAGCATTGCTATCAAAGCTCTTTGTTCAGCCATGAAATTGCTTAATGTTGAATCCGAAAGTATCCTAATGGAGTCCTCAAACTGCCTGGCTTCAATATTTCTTTCCATCAAAGCGAACAAGGATGTAGCAGCTGTTGCTAGAGATACATTATCGCCGTTAGTTGCACTAGCTAACTCTTCGATTTTGGAAGTGGCAGAAATGGCTATAGGTGCTGTTGCAAATCTCATTTTGGACATTGACATAGCAAAGAAAGTTGCTGCAGAAGAAGTTATCTTGCCGGCTACTAGAGTATTGAACGAAGGCACAATTTCTGGAAAAACTCATGCTGCAGCAGCAATTGCTCGCCTTTTACATTCTCATAAAGTTGATAATGCTGTTACTGATTGTGTGGATCGTGCTGGAACTGTTCTTGCATTAGTTTCTTTTTTGGATTCTTCTGTCAATGGATCTATTGACACATCAGAGGCTTTAGAAGCACTTGTCATTTTGTCCAGGTCAGAAGAGACCAGCGCAAATATTAAACCAGCATGTGCAGTTTTGGCTGAATTCCCTAACAGCTTAATCCCAATAGTCCTGTGTATTGCTAATTCGACACCGACATTGCAAGATAAAACAATCGAGATTTTATCTCGATTATGTACAGATCAGCCTGTTGTTTTAGGAGACAGTGTAGTTTCTGCCTCTGGATGTATATCTTCAATAGCTAAAAGGATAATTAGTTCCACTAATGTGAAGGTGAAAATTGGTGGTGTTGCCCTCCTTATTTGTGCTGCAAAAGCAAATCATCAGAGACTGGTGGAGGATCTCAATATATCAAACTTGTCTGTTAACCTTATTCAGTCTCTAGTTGATATTCTTATTTCTGCACAGTCTTCTTTGGGTAATCCTGGGGATGATGATGACAAGGAATCCATCAGCATATGCAGGCATGCAAAAGAAGAGGTCAACGGCCGTGAATCCAAAACTGGAACTTCCATTATATGCGGTGTCGACTTAGCTATATGGTTACTGTCTATTCTTGCTTGTCATGACCAAAAAAATAAAACTGCAATAATGAAGGCTGGAGCAATTGATGCTGTCACCGACAGGATCTCAAATTGTTACTCACAATATTCTCAGATTGACGACAAAGAAGATAACAGCATGTGGATTTGTGCCTTGTTGTTGGCAATATTATTTCAAGATAGAGATATAATACGTGCACATGCAACCACAAAGTCTGTACCAGCACTTGCCAATTTATTGAAGTCAGACGAAACCGAGAACAAATATTTTGCTGCACAATCAATAGCCAGCCTTGTTTGTAATGGTAGCAGGGGAACACTTCTGTCTGTGGCAAATTCTGGGGCAGCAGGTGGACTTATCTCTTTGCTTGGCTGTGCTGATACCGATATACAAGATCTTCTCGAGATGTCCGAGGAATTTTCTTTAGTGCCTTATCCTGATCAAGTGGCTTTAGAGAGGTTGTTTAGAGTTGATGATATAAGAGTTGGTGCCACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTTCTCAAACCAATTCCGGATCGCCCAGGTGCACCATTTTTAGCTCTCGGGTTTTTGACTCAGCTTGGTATAGATTGTCCGTCAAATAAGACTATAATGGTAGAATCCGGGGCTTTAGAGGCTCTTACGAAGTATCTTTCCCTTGGTCCACGAGATGCAACTGAAGAAGCTGCTACAGATCTGTTAGGAATTCTGTTTAGTAGTGCTGATATACGAAAACACGACTCTGCATTTGGCGCTGTTAATCAACTTGTAGCTGTCCTACGTTTAGGAGGAAGAGGTGCAAGGTATAGTGCTTCAAAAGCTTTGGAAAGTTTATTCTCTGCAGACCATATTAGAAACGCTGAGATTGCTCGACAAGCTGTTCAACCCTTGGTAGAAATTCTTAATTCCGGTTCAGAAAGGGAACAGCATGCTGCAATTGCTGCATTAGTTGGGTTACTGAGCGAAAATCCATCAAGAGCACTTGCTGTTGCAGATGTTGAGATGAATGCAGTGGATGTTCTTTATAAGATCCTTTCGTCAAATTGTTCAACGGACCTCAAAGGGGATGCTGCTGAATTATGTTGTGCTCTTTTTGGTAATACAAGGATTCGGTCCACGGTGGCTGCTGCACGATGCATTGAGCCACTAGTCTCTCTCCTTGCAACCGAGTTTAGTTCTGCTCATCATTCAGTTGTTCGGGCATTGGATAGACTTGTTGACGATGAGCAACTGGCTGAATTAGTTGCTGCAAATGGTGCAGTTGTTCCTCTTGTTAGTCTACTGTCTAGTAGAAACTATGTACTTCACGAGGCCATCTCCGGAGCTCTGGTCAAGTTAGGAAAAGACAGACCTGCTTGTAAAATGGAAATGGTAAAAGCTGGAGTCATTGAAAGAATACTGGACATCTTACATGAAGCACCTGATTTTTTGAGCGCAGCTTTTGCAGAACTGTTGCGTATATTAACCAATAATGCTACCATAGCTAAAGGACCATTGGCCGCTAAAGTTGTTGAACCCTTGTTTTCGTTGTTGACAAGATATGATTTTGGGCCCGACGGACAGCACAGTGCAATGCAGGTTTTGGTTAATATCTTAGAACATCCAAAGTGTCGTGCTGACTATTCATTGACTTCTCACAAAGTTATTGAACCACTTATCCCTTTGCTTGATTCACCGATATCAGTAGTGCAACAGTTGGCTGCTGAGCTTCTTTCACATCTGCTCCTAGAAGAACATCTTCAGAAGGATCCAGTGACACCGAAAGTAATTGCCCCTCTTATAAGAATTCTCGGTTCTGGAATACCTTTATTGCAGCAGCGAGCTCTAAAGGCCCTAGTTAGTATTGCACTAACATGGCCGAACGAAATTGCCAAAGAGGGTGGTGTTGTTGAGATTTCCAAAGTGATATTGCAAGCTGATCCATCCCTTCCTCATGCTTTATGGGAATCTGCTGCATCTGTCCTGTCAAGTATTCTGCAATTTAGCTCAGAATTCTACTTGGAAGTGCCTGTTGCTGTGTTGGTAAGGTTGCTTCGATCAGGTTCAGAGAGCACAGTTATCGGTGCATTAAACGCTCTTCTAGTTTTGGAAAGTGATGATGGAACTAGTGCAGAATCTATGGCTGAAAGTGGTGCAATAGAGGCTCTCTTGGAACTCCTAAGATCTCATCAGTGTGAGGAAGTCGCTGCACGACTCTTGGAAGTATTGCTGAACAATGTAAAGATCAGAGAAACAAAAGTTACTAAATCAGCCATCTTACCGTTATCACAATATCTATTGGACCCACAAACCCAAGCACAACACGCAAGGTTATTGGCAACTTTGGCTCTTGGGGATCTTTTCCAGAATGAGGCTCTTACTCGAACAGCTGATGCAGTTTCTGCGAGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAAAATCTTGTGATGTACAGTCGACCAAATAGAAGAGCAGTTGCAGAGGCTGGTGGTGTTCAGGTTGTACTGGATCTGATAGGTTCAAGTAATCCTGAAACTTCTGTACAGGCTGCGATGTTTATTAAACTTCTGTTCTCAAATAATACAATTCAAGAGTATGCTTCTAGCGAAACAGTCAGAGCAATTACTGCCACTATTGAAAAAGATTTATGGGCGAGTGGAACTGTGAACGAGGAATATCTGAAAGCATTAAATTCTCTATTAAGCAACTTCCCACGACTGAGAGCAACCGAACCTGCGACACTTAGTATTCCCCATCTGGTAACATCCTTAAAGACAGGTTCAGAGGCTTGTCAGGAAGCTGCCTTGGATGCACTTTTTCTGCTCAGACAAGCTTGGTCAGCATGTCCTGCTGAAGTTTCAAGAGCTCAGTCAATTGCAGCTGCAGATGCTATTCCTTTCCTGCAGTACTTAATCCAGTCTGGTCCGCCTCGGTTTCAGGAGAAGGCGGAATTTTTATTGCAGTGTTTGCCAGGGACATTGGTGGTGATCGTCAAGCGTGGTAACAATATGAGACAGTCTGTTGGAAACCCTAGTGTGTACTGCAAGATTACTCTTGGCCATAATCCGCCAAGGCTAACCAAGGTGGTCTCCACTGGTCCTAATCCGGAGTGGGAAGAGAGCTTTACATGGTCCTTTGAGAGTCCACCAAAAGGCCAGAAACTACATATTTCTTGCAAAAACAAAAGCAAAGTGGGAAAGAGTAAATTTGGGAAAGTAACAATCCAAATTGATCGAGTGGTAATGCTCGGAGCCGTAGCTGGTGAGTACACTCTATTGCCTGCAAGTAAAAGTGGACCACCAAGGAATCTAGAAATTGAATTTCAGTGGTCTAACAAAGCAAGTGATACAACAACTGATACAGTTCAGCAGTAG 6369 0.4252 MKMGLRDRSSSMEDPDGTLASVAQCIEQLRQSSSSVHEKEYSLRQLMDLIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSTEGQIAAAKTIYAVSQGGVKDHVGSKIFSTEGVVPVLWEQLRTGLKAGNVVESLLTGTLKNLSSNAEGFWNATIQAGGVDILVKLLATGQPSTLANVCFLLAAVMMEDASVCSKVLNAEVTKQLLKLLGPGNDDLVRAEAAGALKSLSAQCKEARREIASSNGIPALINATIAPSKEYMQGECAQALQENAMCALANISGGLSYVISSLGQSLESCSSSTQIADTLGAIASALMIYDNKAETTKPSDPLVVEQTLMKQFKPRLPFLVQERTIEALASLYGNPILSAKLANSDAKHLLVGLITMAANEVQDELIKALLTLCKSEGSLWRALQGRDGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSARILKNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKDIAAKTINHLIHKSDTTTISQLTALLTSDLPDSKVYVLDALRSMLCVAPLSDILREGSAAGDAFDTVIMLLSSTKEETQAKAASALAEIFEARKDLRESSIAIKALCSAMKLLNVESESILMESSNCLASIFLSIKANKDVAAVARDTLSPLVALANSSILEVAEMAIGAVANLILDIDIAKKVAAEEVILPATRVLNEGTISGKTHAAAAIARLLHSHKVDNAVTDCVDRAGTVLALVSFLDSSVNGSIDTSEALEALVILSRSEETSANIKPACAVLAEFPNSLIPIVLCIANSTPTLQDKTIEILSRLCTDQPVVLGDSVVSASGCISSIAKRIISSTNVKVKIGGVALLICAAKANHQRLVEDLNISNLSVNLIQSLVDILISAQSSLGNPGDDDDKESISICRHAKEEVNGRESKTGTSIICGVDLAIWLLSILACHDQKNKTAIMKAGAIDAVTDRISNCYSQYSQIDDKEDNSMWICALLLAILFQDRDIIRAHATTKSVPALANLLKSDETENKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCADTDIQDLLEMSEEFSLVPYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGFLTQLGIDCPSNKTIMVESGALEALTKYLSLGPRDATEEAATDLLGILFSSADIRKHDSAFGAVNQLVAVLRLGGRGARYSASKALESLFSADHIRNAEIARQAVQPLVEILNSGSEREQHAAIAALVGLLSENPSRALAVADVEMNAVDVLYKILSSNCSTDLKGDAAELCCALFGNTRIRSTVAAARCIEPLVSLLATEFSSAHHSVVRALDRLVDDEQLAELVAANGAVVPLVSLLSSRNYVLHEAISGALVKLGKDRPACKMEMVKAGVIERILDILHEAPDFLSAAFAELLRILTNNATIAKGPLAAKVVEPLFSLLTRYDFGPDGQHSAMQVLVNILEHPKCRADYSLTSHKVIEPLIPLLDSPISVVQQLAAELLSHLLLEEHLQKDPVTPKVIAPLIRILGSGIPLLQQRALKALVSIALTWPNEIAKEGGVVEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSESTVIGALNALLVLESDDGTSAESMAESGAIEALLELLRSHQCEEVAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQHARLLATLALGDLFQNEALTRTADAVSASRALVNVLEDQPTEEMKVVAICALQNLVMYSRPNRRAVAEAGGVQVVLDLIGSSNPETSVQAAMFIKLLFSNNTIQEYASSETVRAITATIEKDLWASGTVNEEYLKALNSLLSNFPRLRATEPATLSIPHLVTSLKTGSEACQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPFLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIVKRGNNMRQSVGNPSVYCKITLGHNPPRLTKVVSTGPNPEWEESFTWSFESPPKGQKLHISCKNKSKVGKSKFGKVTIQIDRVVMLGAVAGEYTLLPASKSGPPRNLEIEFQWSNKASDTTTDTVQQ* 2123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0926 2122 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 2111 - -
Tpr3g0926 2122 Gene3D - 782 1130 IPR011989 -
Tpr3g0926 2122 Pfam Armadillo/beta-catenin-like repeat 63 93 IPR000225 GO:0005515
Tpr3g0926 2122 Pfam Armadillo/beta-catenin-like repeat 484 523 IPR000225 GO:0005515
Tpr3g0926 2122 SUPERFAMILY ARM repeat 34 352 IPR016024 -
Tpr3g0926 2122 Gene3D C2 domain 1990 2120 IPR035892 -
Tpr3g0926 2122 Pfam C2 domain 1990 2081 IPR000008 -
Tpr3g0926 2122 Gene3D - 373 613 IPR011989 -
Tpr3g0926 2122 Gene3D - 8 372 IPR011989 -
Tpr3g0926 2122 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 495 537 IPR000225 GO:0005515
Tpr3g0926 2122 SUPERFAMILY ARM repeat 985 1120 IPR016024 -
Tpr3g0926 2122 SMART arm_5 1189 1230 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 227 268 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 1441 1481 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 53 94 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 270 319 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 95 135 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 1527 1567 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 1399 1439 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 1817 1857 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 484 524 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 1272 1312 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 441 482 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 692 730 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 526 566 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 1358 1398 IPR000225 GO:0005515
Tpr3g0926 2122 SMART arm_5 1690 1729 IPR000225 GO:0005515
Tpr3g0926 2122 CDD C2 1992 2082 - -
Tpr3g0926 2122 Coils Coil 256 276 - -
Tpr3g0926 2122 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1990 2097 IPR035892 -
Tpr3g0926 2122 SMART C2_3c 1991 2087 IPR000008 -
Tpr3g0926 2122 Gene3D - 1577 1989 IPR011989 -
Tpr3g0926 2122 Gene3D - 614 779 IPR011989 -
Tpr3g0926 2122 SUPERFAMILY ARM repeat 1146 1526 IPR016024 -
Tpr3g0926 2122 SUPERFAMILY ARM repeat 1540 1986 IPR016024 -
Tpr3g0926 2122 SUPERFAMILY ARM repeat 22 901 IPR016024 -
Tpr3g0926 2122 Gene3D - 1138 1390 IPR011989 -
Tpr3g0926 2122 ProSiteProfiles C2 domain profile. 1971 2088 IPR000008 -
Tpr3g0926 2122 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 2111 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Tpr3g0926 2122 Gene3D - 1391 1576 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0926 Tpr-Chr3 8573483 8583575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0926 457 579 U-box Gene Family AT2G23140 40.323 1.24e-10 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0926 - - mtr:MTR_8g091470 3739.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0926 3 8573483 8583575 Tpr3g0926 3 8573483 8583575 ECH
Tpr3g0926 3 8573483 8583575 Tpr2g4957 2 55334155 55344717 PCT