Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0919 ATGGATTCTTCATCTTCCCAATATGTTTCCACAAGAAATATTGGTGTATATGATCCTACTCACCAATTTACTATATGGGAAGATCATTTCAAGAGTAATGGTGATTTAAGTTTATATGAACCTAATATGAAGTTTAATAATCAGTCAGAAGATGCTTCTTTTGGAATATTGGGAACATCAATCAAGTATGACCAACAAGCTAATAAACTTACTGAGAAGATGCAAAGACGTCTCGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTTTGAAGAAAAAGGCTCATATACAACAGTTAGAATCGTGTCGTTTGAAGCTAGTGCAGGTAGAGCAAGAGCTAGATAATACAAGACAACAGGGATTGTATATTGGTGGTGGATTGGATTCTAATAATTTAGGTTTTGCCGGTTCTGCAAATTCAGAAATAACAACTTTTAAGATGGAGTATGAACATTGGGTGGAAGAGCAAAACAGACAAATCTTGGAATTGAATAGTGCTTTAAGTTCTCATATAAGTGACACACAGATTGAGGAACTTGTAAATGGCATCATGAATCACTATTTCAAACTCTTTTGCATGAAATCTGATGCTGCAAAAATAGATGTTTTCTATGTTATAACCGGCATGTGGAAAACAACATCCGAACAATTTTTCTTGTGGATTGGAGGTTTTCGCCCCTCTGAACTTCTAAAGGTTCTGGTTCCTTTGATTGAACCATTGACAGAACAACAACGGTTTGATGCGTATAATCTTGAAAAGTCATGCCGGCAAGCAGAAGACGCCCTTTCACAAGGTATGGAAAAACTCCAGGGAATGCTTACCGACACAGTAGCAGCAGGAGAACTCATTGAAGGAACTTACACTCCACATATGGATACTGCAATAGAGAGGCTGGAAGCTCTGGCTAGCTTTGTCAACCAGGCTGATCATCTACGACAGGAAACCTTGCAGCAGATGTCTCGAATACTTACCATACGTCAAACTGCTCGATGGCTGCTTGTTTTGGGCGAGTATTTTCAACGCCTAAGGGATTTGAGCAAGGTATGGGCCAATCGTGGCCGTGAACCTGCTTAG 1074 0.3976 MDSSSSQYVSTRNIGVYDPTHQFTIWEDHFKSNGDLSLYEPNMKFNNQSEDASFGILGTSIKYDQQANKLTEKMQRRLAQNREAARKSRLKKKAHIQQLESCRLKLVQVEQELDNTRQQGLYIGGGLDSNNLGFAGSANSEITTFKMEYEHWVEEQNRQILELNSALSSHISDTQIEELVNGIMNHYFKLFCMKSDAAKIDVFYVITGMWKTTSEQFFLWIGGFRPSELLKVLVPLIEPLTEQQRFDAYNLEKSCRQAEDALSQGMEKLQGMLTDTVAAGELIEGTYTPHMDTAIERLEALASFVNQADHLRQETLQQMSRILTIRQTARWLLVLGEYFQRLRDLSKVWANRGREPA* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0919 357 Coils Coil 67 87 - -
Tpr3g0919 357 SMART brlzneu 69 151 IPR004827 GO:0003700|GO:0006355
Tpr3g0919 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 71 113 IPR004827 GO:0003700|GO:0006355
Tpr3g0919 357 Coils Coil 92 119 - -
Tpr3g0919 357 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 356 - -
Tpr3g0919 357 SUPERFAMILY Leucine zipper domain 73 106 IPR046347 GO:0003700|GO:0006355
Tpr3g0919 357 Pfam bZIP transcription factor 73 101 IPR004827 GO:0003700|GO:0006355
Tpr3g0919 357 Pfam Seed dormancy control 160 234 IPR025422 GO:0006351|GO:0043565
Tpr3g0919 357 ProSiteProfiles DOG1 domain profile. 142 352 IPR025422 GO:0006351|GO:0043565
Tpr3g0919 357 PANTHER TRANSCRIPTION FACTOR TGA9 1 356 - -
Tpr3g0919 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 76 91 IPR004827 GO:0003700|GO:0006355
Tpr3g0919 357 Gene3D - 71 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0919 Tpr-Chr3 8514225 8517078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0919 1 356 Calmodulin-binding Proteins AT5G10030 61.370 3.82e-162 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr3g0919 DOG1 2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0919 K14431 - gmx:100780003 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0919 3 8514225 8517078 Tpr3g0919 3 8514225 8517078 ECH
Tpr3g0919 3 8514225 8517078 Tpr2g4966 2 55448280 55451379 ECH
Tpr3g0919 3 8514225 8517078 Tpr2g4966 2 55448280 55451379 PCT