Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0897 ATGGATGATTTTTTTGATGATATTGATACTATTGTTCCTACTACACGTGCTAAAACAGGTTCAAGGTTTGCACCGAAGGCGAAACCAAAACCGAAACAATCGATTCAAAAGAATGTATCTGCATCATCAGAAAATGCAGTTTCTTCTAAAGATGGGAACAATGTGCTTGTTGACTCATCAACCACTCACAAAGAATCTGAAGGAAGTTCTCAAAATGAATCTCAGAATGTAGTTGCTGTAAGTTCCTCAATTGAAGAACCTATAAGGTCTGATCATAATCCTGATGTCAATAACGTAACAGCACAACCAGTTCAGCCTGCTAATGCTGTAGAGAGTGTATTGAATAGTGTGGCTGCTCCATCTACTAATTGCCCAACCATAGGTAAGAACAAAGAGCTGTCTATAAATGGAGAAGGTTCATTTCTTGATATCAACAAGAGTTTGGAAGTTAGCCTAAACGAGGGTTCATTTCTTGATAGCAACATCCATTCAAATTTTGAGTCTGGAGAACTGCCACAGGTCTTGTGTTCGGAATTTGAGTTTGATCCTTTCAGCAATGTCCTCCCTGATCCTGGCACTAGGAATGCCAAAAAGTTTCAACCCAAGATTAAGCCACGGCCTAGAGTCAGCAATACACCAGCTACTGCTTCTGCTTCATCTGGTATGCCATTCTCTGAAGACAATACAAGCTTGGAAACAGTTATTCCTTCTCATCCAGATTCCCTGAATGCTATGACATCAGAGACTATAGTTCATGATGGAACTAGAGATTTGCCTTCTAGCTTTGGAAAATCAGCTGCAGAGACTGCAGATATTTTTTCCGGGCTAGAATCACTTGATGACATTCTCAACCAAGCTGCAACTGGTACAGGAAAACCAGATCTTAAATCTTTCAACGGGAAGGGTGCAGAGGAAGATTTTGTCCTTCCGGGATATAGTAGGACAGAAACACAGGAAGGCACTGACTTGAATGCTGACTGCCCAATTGACAATGTCTATGATTATCAATCCATGAAATCTGGCACAGATCCAACATCTGAAATTCCAAGGCATGAAGTGTTGACAAATTCTGCAGATAGTCCCACATTGGCGGACCTTATGCAGCAAGACGGTACTGGGGAGAAAGAAGATGCTAACGAGAGGAAAAAATCTGGAAAGAAGAATAAAAGATCCTCTATTGCTGGTGTGGAAGATAAAGGTGGTAAAACCTCAAGGAAGCCGAGAAAACAATCGGTTCGTAAACCTGCTAAAAACTCATTGAATGAGCCTATTGAGGACAATGATGATGTCCTCGACCCTCCTTATGAGTTTGATGGAGATGAACTTGAAGAAAATGACGATGAGAACGAAGTGGATAATTCATCCAAGAAAAAAAGAGCATCAACAAGTTCAAAGAAGAAATCTGTGGCTAAAAATGGAAAAACATCTGGAAAACGCAAGAAGGCTAATGATGATTTAGACAAGGTTACTGAAAAACCTCCTAAAAAGTTCCCACATTCATCTCGGCGAAAAAAAAGATGTGTGGACAAGGCTTTGCTGAATGATGAATATCTTGATCAACGAACATTACCTCTTAGGGATATTATTTTACTTGCCGAACATAAAGAGCGATTGGCGAAAAAGGAGGGAACAACTACTAATACATCTTCCACCAATCAAAGTGATGGGGATTTTCTTCATGAGACTGATGTTAATAATGAAGAGGAGTTTTATGGGTCAGATGATGGTTATAGAGACCCATATGATGGTTATAAAGACCCATATGATGGTCAATATCAAGCCAGTGAAAATATTACATCAACTGCTCCTTTATTGAATTACCAGTCATTCATGGAGAAGACACCTAGGGGAAAATGGTCAACAGGAGATACTGAAAAGTTTTACGAGGCTATTAGGCAGTTTGGCACAGATTTTACTATGATACAACAGCTTTTCCCTGATAAAACACGTCATCAAATTAAGTTGAAGTACAAGAAGGAAGAGCGGCAACATCCTTTACTGTTATCTGATGCTGTGAATAATCCTACAAAAGATCTTTCTTTATTTAAATTGGTGATTGAGAGACAGATTCAAAAGTCTAAGGAAGAACAAGATGCTGCTGGAGATGCCTCAGATTTAATGCCTGGGGAGGAGGTTGAGGAGCCGACGACACCTGGAACTAATGAAGAGGTTGCAAAACCTCAGCAGGAGCAGGACCACATCAATGTTAAAGATCAGGAAGATTCTATGCCAGTTCCAGGGCAATCTGATGATGACGATGATGATGACGACGATGGTGAAGATCCATTACTAAAATGGTCTCAGTATCAAAGTTCTATTTAG 2322 0.4001 MDDFFDDIDTIVPTTRAKTGSRFAPKAKPKPKQSIQKNVSASSENAVSSKDGNNVLVDSSTTHKESEGSSQNESQNVVAVSSSIEEPIRSDHNPDVNNVTAQPVQPANAVESVLNSVAAPSTNCPTIGKNKELSINGEGSFLDINKSLEVSLNEGSFLDSNIHSNFESGELPQVLCSEFEFDPFSNVLPDPGTRNAKKFQPKIKPRPRVSNTPATASASSGMPFSEDNTSLETVIPSHPDSLNAMTSETIVHDGTRDLPSSFGKSAAETADIFSGLESLDDILNQAATGTGKPDLKSFNGKGAEEDFVLPGYSRTETQEGTDLNADCPIDNVYDYQSMKSGTDPTSEIPRHEVLTNSADSPTLADLMQQDGTGEKEDANERKKSGKKNKRSSIAGVEDKGGKTSRKPRKQSVRKPAKNSLNEPIEDNDDVLDPPYEFDGDELEENDDENEVDNSSKKKRASTSSKKKSVAKNGKTSGKRKKANDDLDKVTEKPPKKFPHSSRRKKRCVDKALLNDEYLDQRTLPLRDIILLAEHKERLAKKEGTTTNTSSTNQSDGDFLHETDVNNEEEFYGSDDGYRDPYDGYKDPYDGQYQASENITSTAPLLNYQSFMEKTPRGKWSTGDTEKFYEAIRQFGTDFTMIQQLFPDKTRHQIKLKYKKEERQHPLLLSDAVNNPTKDLSLFKLVIERQIQKSKEEQDAAGDASDLMPGEEVEEPTTPGTNEEVAKPQQEQDHINVKDQEDSMPVPGQSDDDDDDDDDGEDPLLKWSQYQSSI* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0897 773 MobiDBLite consensus disorder prediction 340 508 - -
Tpr3g0897 773 Pfam Myb DNA-binding like 609 693 IPR039467 -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 340 367 - -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 14 91 - -
Tpr3g0897 773 ProSiteProfiles SANT domain profile. 618 662 IPR017884 -
Tpr3g0897 773 SUPERFAMILY Homeodomain-like 617 665 IPR009057 -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 202 225 - -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 477 496 - -
Tpr3g0897 773 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 194 761 - -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 425 449 - -
Tpr3g0897 773 SMART sant 615 663 IPR001005 -
Tpr3g0897 773 CDD SANT 618 659 IPR001005 -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 693 773 - -
Tpr3g0897 773 Gene3D - 619 697 - -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 460 476 - -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 33 91 - -
Tpr3g0897 773 PANTHER TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG 194 761 - -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 210 225 - -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 745 761 - -
Tpr3g0897 773 MobiDBLite consensus disorder prediction 370 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0897 Tpr-Chr3 8375018 8381899 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr3g0897 Myb_DNA-bind_7 1.7e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0897 K15198 - gmx:100792788 591.267