Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0891 ATGGACTACTATTTTGTAAACTCTCATGCTACTACCAATTTTGCTCAATCTACTCATCATCATCATCATATGATTCCTAATTCCTCTTCTCATGAGTTTATGCAACAACTATCTGATTATCTCATGTTTGATGATATTCACCATGATCAAGAATCAAGAACACAAAGTATTGAATCATTAGAAAAGGTAACATCACAAAGTACTAATGAATCATTAGAGAAGATAACATTCAGTGATGCTAGTCAAGGATTCAATGATGCAACCTCTAAGAGCAATAACATCCAAAAAAAAGGGATTACGAGAGAAGTGGGGCCAAAGATAGCTTTTAGAACAAAATCAGAGATTGAAATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGATCGTGAAGAACAATCTCAACCTAAGGAACTACTATAAATGTTCAAGTGTGGGATGCAAAGTGAAGAAGAGAGTGGAAAGAGATAGAGATGATTCAAGCTATGTGATAACAACTTATGAAGGTGTGCACAACCATGAGAGCCCATTTTCCTCCTACTGTAGCCAAATCTCCTTTCTGCAATATTCTGATGCATAA 585 0.3538 MDYYFVNSHATTNFAQSTHHHHHMIPNSSSHEFMQQLSDYLMFDDIHHDQESRTQSIESLEKVTSQSTNESLEKITFSDASQGFNDATSKSNNIQKKGITREVGPKIAFRTKSEIEIMDDGYKWRKYGKKIVKNNLNLRNYYKCSSVGCKVKKRVERDRDDSSYVITTYEGVHNHESPFSSYCSQISFLQYSDA* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0891 194 SMART WRKY_cls 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g0891 194 SUPERFAMILY WRKY DNA-binding domain 110 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g0891 194 Gene3D WRKY domain 103 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g0891 194 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 183 IPR044810 GO:0003700
Tpr3g0891 194 Pfam WRKY DNA -binding domain 119 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g0891 194 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 10 183 - -
Tpr3g0891 194 ProSiteProfiles WRKY domain profile. 113 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0891 Tpr-Chr3 8334959 8337722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0891 41 186 WRKY Transcription Factor Family AT5G64810 52.632 2.08e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g0891 WRKY 7.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0891 - - cam:101494195 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0891 3 8334959 8337722 Tpr3g0891 3 8334959 8337722 ECH