Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0861 ATGGCGAAATCATATGAAACCGAACTTCCACTGAAAGCTTTTGGTTGGGCTGGTACTGATACCTCTGGCACCCTTTCTCCATTCAATTTCTCCAGAAGGGAAAATGGCGATGATGATGTTACTCTCAAAATCCTTTTCTGTGGTGTTTGTCATTCTGATCTACACACTCTCAAGAACGATTGGGGTTTCACTACTTACCCTGTTGTTCCTGGCCATGAAATTGTTGGCGAGGTGACAAAAATTGGAAACAATGTGAAAAATTTCAAAGTGGGGGATAAGGTTGGTGTTGGTGTGATGGTGGAGTCTTGTCAGACTTGTGAGAATTGTCAGCAGGATTTAGAGAATTACTGTCCTAAACTTGTATTCACCTATAACTCTCCTTATAATGGGACACGAACCTATGGCGGCTATTCTGATTTCGTGGTTGTTCACCAGCGGTATGTACTGCAGTTTCCTGCAAACTTACCCCTTGATGCTGGTGCTCCACTACTGTGTGCCGGGATCACTGTGTATAGCCCAATGAAATATTATGGGATGACTGAGCCTGGCAAACATTTGGGAGTGGCAGGGCTTGGTGGGTTAGGCCATGTTGCAATCAAATTTGGTAAAGCATTTGGGCTGAAGGTTACTGTCATTAGTACCTCACCAAACAAGAAAAGTGAGGCCATTGACAAACTTGGTGCTGATTCTTTCATTGTTTCCAATGACCCTGAACAAATGAAGGCTGCTACAGGAACCATAGACTATATCATAGACACAATTTCTGCTGATCATTCCGTGTTGCCACTGCTTGGTCTACTGAAGCTGAATGGGAAGCTGGTCACTGTAGGGTTGCCAAGCAAGCCCCTTGAGCTCCCTGTCTTTCCATTAGTTGCAGGGCGGAAGCTTATAGGGGGGAGCAACTTTGGCGGGATAAAGGAGACTCAGGAGATGCTTGATTTCTGTGGAAAGCATAACATAACTGCAGATATTGAGCTGATTAAGATGGACCAAATCAACACAGCAATGGAAAGGCTTAGCAAAGCTGATGTGAAATATCGCTTTGTGATTGATGTGGCCAACTCTTTCTCGAGTTTGTAG 1080 0.4435 MAKSYETELPLKAFGWAGTDTSGTLSPFNFSRRENGDDDVTLKILFCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGEVTKIGNNVKNFKVGDKVGVGVMVESCQTCENCQQDLENYCPKLVFTYNSPYNGTRTYGGYSDFVVVHQRYVLQFPANLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKKSEAIDKLGADSFIVSNDPEQMKAATGTIDYIIDTISADHSVLPLLGLLKLNGKLVTVGLPSKPLELPVFPLVAGRKLIGGSNFGGIKETQEMLDFCGKHNITADIELIKMDQINTAMERLSKADVKYRFVIDVANSFSSL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0861 359 SMART PKS_ER_names_mod 23 350 IPR020843 GO:0016491
Tpr3g0861 359 CDD CAD1 14 351 - -
Tpr3g0861 359 Pfam Zinc-binding dehydrogenase 193 314 IPR013149 -
Tpr3g0861 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 320 IPR036291 -
Tpr3g0861 359 Gene3D - 166 322 - -
Tpr3g0861 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Tpr3g0861 359 Pfam Alcohol dehydrogenase GroES-like domain 38 150 IPR013154 -
Tpr3g0861 359 Gene3D - 16 352 - -
Tpr3g0861 359 PANTHER ALDEHYDE REDUCTASE 12 356 - -
Tpr3g0861 359 SUPERFAMILY GroES-like 22 184 IPR011032 -
Tpr3g0861 359 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 12 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0861 Tpr-Chr3 8087615 8091313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0861 12 356 Monolignol Biosynthesis Gene Families AT2G21730 70.402 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0861 K00083 - gmx:100819684 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0861 3 8087615 8091313 Tpr3g0861 3 8087615 8091313 ECH