Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0858 ATGAAAAGTAACAATATTCCATATGTTATTGTGATAATCATACAAGCCATATATGCTGCTATGTTTATTCTATCAAAAGCTGCATTTGATCATGGCATGAACAACTTTGTCTTTGTCTTCTATAGACAATCTGCAGCAACTATTTTTCTTATACCTTTTGCTCTCTTCTTTGAATGGAAAACTGCACCTCCTCTGCCATTTACAACTTTTTGCAAGATATTCTTCATTTCTTTCATTGGGATAACAGCAAGCTTGGACATATATGGTATTGCTCTAATAAAAACTTCAGCAACTTTGGCTTCTGCTACTACCAACTGTCTTCCAGTTATTACCTTCTTCTTGGCACTCCTATTCAGGATCGAAGTTTTGAAAGTAAAGACAGCTGCTGGGGCAGCTAAGTTGGCTGGTGTTGTGGCATGTCTGGGTGGAGCAGCAACTCTTGCTTTTTATAAAGGTCCTCATTTACAACTTTTAAGCCATTTTCACTTTTTGGGAAATTACCATAAAACCCAACAACAACATCAGGGCCACGACTGGATCAAGGGTTGCTTCCTCATGCTTCTTTCCAATACCTTTTGGGGAATGTGGCTTGTACTACAAATTTTTATCATAAAAGGGTATCCATCAAAGTTATTGCTCACAACTCTTCAGTGTTTCTTAAGCTCAATTCAGTCTTTGGTTGTAGCGTTAGCCGTAGAAAGGGATCTTGAGCAATGGAAATTGGGTTGGAATGTCAGACTCCTCGCTGTGTTATATTGCGGAATTATGGTGACTGGTGTGACTTATTATTTACAAACATGGGTTATAGAGAAGAGAGGACCAGTGTTTCTAGCCATGTCAACACCATTAGCTTTGATCATGACTATGTTCTCCTCAGTAATTCTCTTGGGAGAGATTATAAGTTTAGGAAGTCTTTTAGGTAGCTGTGCTTTGGTTTTAGGATTGTACTTTGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCGAAAAGTTCCGAAGACTTGGAGCAAGCTTCGTGTTTGAACGAAACTAACAAGTGA 1038 0.3902 MKSNNIPYVIVIIIQAIYAAMFILSKAAFDHGMNNFVFVFYRQSAATIFLIPFALFFEWKTAPPLPFTTFCKIFFISFIGITASLDIYGIALIKTSATLASATTNCLPVITFFLALLFRIEVLKVKTAAGAAKLAGVVACLGGAATLAFYKGPHLQLLSHFHFLGNYHKTQQQHQGHDWIKGCFLMLLSNTFWGMWLVLQIFIIKGYPSKLLLTTLQCFLSSIQSLVVALAVERDLEQWKLGWNVRLLAVLYCGIMVTGVTYYLQTWVIEKRGPVFLAMSTPLALIMTMFSSVILLGEIISLGSLLGSCALVLGLYFVLWGKSREQMPKSSEDLEQASCLNETNK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0858 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 41 149 - -
Tpr3g0858 345 Pfam EamA-like transporter family 181 319 IPR000620 GO:0016020|GO:0016021
Tpr3g0858 345 Pfam EamA-like transporter family 7 132 IPR000620 GO:0016020|GO:0016021
Tpr3g0858 345 PANTHER WAT1-RELATED PROTEIN 8 327 - -
Tpr3g0858 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 324 - -
Tpr3g0858 345 PANTHER WAT1-RELATED PROTEIN 8 327 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0858 Tpr-Chr3 8068882 8073102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0858 7 253 Nodulin-like Gene Family AT5G64700 59.289 8.21e-93 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0858 - - gmx:100796986 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0858 3 8068882 8073102 Tpr3g0858 3 8068882 8073102 ECH
Tpr3g0858 3 8068882 8073102 Tpr3g3109 3 34208182 34213867 PCT