Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0846 ATGAATATAATGGATTATGAGCAATTTGATTTCTCATTTATCCCTCCTTACATAAATCAGCTACATGAGTGTAGCTTAGAAAATGCATCTACATTCCAAACAGAAGATCTCTTATCTCCAAATACAATCCTAGATGAAATATTATTTGATCAAGATCAATTAGAAGATCTCTTATCTCCAAATACCATCCTAGACGAATTTTTCGTTCAGGATGAGTCCATGGAAGCATTGCTGCAGCAACAAACAGACCATGAATTCGATACCATAAACCACGACCAGACAATGCCTCTAGGGAATGAATCGTGTCATCAAGTTACCGAGAAAGGCCGCAAAAATGATGATTCTTATTGGAAGGTTGTTCAAGAAGAGTTAATGGAAGAGACAAGTCTAGTTGATCTCTTGCTGATAGGAGCTGAAGCTGTTGAATCACAGAACATGACTCTTGCTTCTGACATAATCGAAAAACTAAACAATGCCTCGTCTTTAGAAAAAGGCGATAATTTATTGAATAGGCTGTGTCCTTTCTTTACTCGAGGTTTGTATTATAAAACTACAAATGCTGCTGAATTCCACTGTGATCATGTTTCTACACAGACAAGCACATTCTGTGTGTTTCAGATACTTCAAGAACTCTCTCCCTATGTAAAATTTGCTCATTTCACAGCAAACCAAGCAATTTTAGAAGCTACGGACGGTGCTGAGCAAGTTCATGTCATTGATTTTGATATCATGGAGGGAATCCAATGGCCATCATTGATGGTTGACTTTGCAATGAGAAAGAACACTACTTCCCTTAGAGTAACAGCAATCACAGTAGATCAGCAAAGTGCAGCCTCAGTTCAACAAACAGGAAGAAGGCTTAAAGAGTTCGCGGATTCAATCAATTTTCCATTCATGTTCGATACGATGATGATGGTGAGTGAAGAAGATTTTCAAGGAATTGAACTTGGTGGCACACTTATTGTCAATTGTATGATACATCAGTGGATGCCAAACAGAAGTTTCTCACTGGTCAAAACTTTTCTTAATGGTGTAAGAAAATTATCGCCTCGGCTTTTTGTTTTAGTAGAAGAAGAACTGTTTAATTTTTCAAGACTCAAATCTATGTCTTTTGTGGAGTTTTACTGTGAAGCTTTACATCACTATATTGCAGTTTCTGATTCACTTGTTAGTACTCTTTGGAGTAGTCATAAGATGGAGTTAAATCTTATAGAGAAAGAGGTATTGGGAAATAGAATTTTAGACAGTGTAAGACAGTTTCCTTGTGAAAGAGGGGAGAGAATATTGTGGGAAGAAAGGTTTTTTTATTCATTGAAAGGGTATAAACGTGTTGGTATGAGTACATGTAATATTTCACAGGCAAAGTTATTGGTTAGCTTGTTTGGTAAAGGGTATTGGGTTCAATTTGAGAATTGTAGATTGGCTTTGTGTTGGAAGTCAAGACCTTTGACTTCTGTTTCAATCTGGGTACCAACATATTATATTATGAGTGACAGGGTCAAATAG 1506 0.3665 MNIMDYEQFDFSFIPPYINQLHECSLENASTFQTEDLLSPNTILDEILFDQDQLEDLLSPNTILDEFFVQDESMEALLQQQTDHEFDTINHDQTMPLGNESCHQVTEKGRKNDDSYWKVVQEELMEETSLVDLLLIGAEAVESQNMTLASDIIEKLNNASSLEKGDNLLNRLCPFFTRGLYYKTTNAAEFHCDHVSTQTSTFCVFQILQELSPYVKFAHFTANQAILEATDGAEQVHVIDFDIMEGIQWPSLMVDFAMRKNTTSLRVTAITVDQQSAASVQQTGRRLKEFADSINFPFMFDTMMMVSEEDFQGIELGGTLIVNCMIHQWMPNRSFSLVKTFLNGVRKLSPRLFVLVEEELFNFSRLKSMSFVEFYCEALHHYIAVSDSLVSTLWSSHKMELNLIEKEVLGNRILDSVRQFPCERGERILWEERFFYSLKGYKRVGMSTCNISQAKLLVSLFGKGYWVQFENCRLALCWKSRPLTSVSIWVPTYYIMSDRVK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0846 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 490 IPR005202 -
Tpr3g0846 501 PANTHER OS12G0162700 PROTEIN 6 490 - -
Tpr3g0846 501 Pfam GRAS domain family 130 489 IPR005202 -
Tpr3g0846 501 ProSiteProfiles GRAS family profile. 121 490 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0846 Tpr-Chr3 7975009 7976875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0846 203 489 GRAS Transcription Factor Family AT1G55580 36.076 4.34e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g0846 GRAS 1.7e-77 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0846 - - lja:Lj0g3v0198459.1 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0846 3 7975009 7976875 Tpr3g0846 3 7975009 7976875 ECH