Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0845 ATGGAGTTCTTGGACGAAGACGCGAGACCGAGGTTTATGTTTCAGTCAGGTGCACCAGCAGCCACTGAATCACAGCCTTACGAGAAACCAACGAAGCCGTTAATCGCTGTAACCGTTGCAATCTCTTCAATTTTCTTCGCTCTCGCTATCTTCGTTTTCCAATCGGAACCTTACACATCGATTCTCATCTGGTTCGCACTCTCTCTTCTCATTGGTCCTTTTGCTCCGAGCTCAATCACCGGCGGTGATTTCCGTGTCGGACGTGGTCATGTCGTTAATTTTCCTGATCAGGATACATCAACCGATGATGAAGACGTCAGGAAAAGATCTCAGCAGCGCCGATCTAAGCCGCGTAGATCGGAGGATGTTGCGGCTGTAGTTGTTCCGGCGCCGGTAGTTTCAAACGGAGGTGCGTCGAAGAATCGAAATGGTAATGGTGACGGAAGCGGTGTTGCATTGACGGCGGTGGTGGAAGAAACGGAATGGAACGAAGATGACATTGAGATTTTGAAGAAGCAGATGGTGAAACATCCGGTGGGGAAACCAGGACGGTGGGAGGCAATAGCGGAGGCGTTCGGAGGGCGGCATAAGGCGGAAAGTGTGGTAAAGAAGGCGAAGAATTTGGGGGAGAAGAAGGTTGATGATTCGGATTCGTATGATCAGTTTTTGAAGAAAAGAAAAGCGTTGGATAAGAGACTTGTTGAAGAAGGAGGAGGAGAAGTAGCGACGGTTGAGAAAGGTGAAAGTGTTTGGAGTTCAAATGAGGATATTGCTTTGTTGAATGCTTTGAAAGCTTTTCCTAAAGATGTTGCAATGAGATGGGAGAAAGTTGCTGCTGCTGTTCCGGGAAAATCGAAAGCAGCTTGTATGAAAAGAATTGCTGAATTGAAGAAAGGGTTTCGTACTGCGAAATCTGGATCAGAAGTTTAG 930 0.4731 MEFLDEDARPRFMFQSGAPAATESQPYEKPTKPLIAVTVAISSIFFALAIFVFQSEPYTSILIWFALSLLIGPFAPSSITGGDFRVGRGHVVNFPDQDTSTDDEDVRKRSQQRRSKPRRSEDVAAVVVPAPVVSNGGASKNRNGNGDGSGVALTAVVEETEWNEDDIEILKKQMVKHPVGKPGRWEAIAEAFGGRHKAESVVKKAKNLGEKKVDDSDSYDQFLKKRKALDKRLVEEGGGEVATVEKGESVWSSNEDIALLNALKAFPKDVAMRWEKVAAAVPGKSKAACMKRIAELKKGFRTAKSGSEV* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0845 309 SUPERFAMILY Homeodomain-like 248 293 IPR009057 -
Tpr3g0845 309 Gene3D - 243 308 - -
Tpr3g0845 309 PANTHER TRANSCRIPTION FACTOR MAMYB 1 308 - -
Tpr3g0845 309 SMART sant 158 211 IPR001005 -
Tpr3g0845 309 SMART sant 247 299 IPR001005 -
Tpr3g0845 309 SUPERFAMILY Homeodomain-like 158 198 IPR009057 -
Tpr3g0845 309 MobiDBLite consensus disorder prediction 100 121 - -
Tpr3g0845 309 MobiDBLite consensus disorder prediction 95 122 - -
Tpr3g0845 309 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 308 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Tpr3g0845 309 CDD SANT 161 208 IPR001005 -
Tpr3g0845 309 Gene3D - 157 214 - -
Tpr3g0845 309 ProSiteProfiles Myb-like domain profile. 243 297 IPR001005 -
Tpr3g0845 309 CDD SANT 251 292 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0845 Tpr-Chr3 7972508 7973558 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr3g0845 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0845 - - gmx:100780658 371.318