Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0833 ATGGCTTCTTCTCTCTTCACTTTCTCTCTTTTCATTTTCTTCACACTTTCCTCCGCCTCTCACCACCACCATCAGTCACCTACACCCGCCCCAACCCCCACCCACACCGGCTCTGCTTCCGCCGCGTCGGAGATCCAACAAGCCTGCAAAGCAACTCGCTTCCCACAACAATGCGAATCATCTCTCACAAATCTCACTACAAATCCCACCACTGTCCAACTTATCCAAACCGCAATCTCTCACTCATCGGAAAAGCTCGTAACCGCTCTATCAATGGTTAAGGAAATTCTAAAAACTTCTTCCGACAGTCAGAATCGTACCGTCGCCTCCACCACCTGCATCGAAACCCTCACAAATTCCCAATACCGCATTTCCACCTCCAACGAAGCCTTAGAAAATGGAAAAATCAAAGACGCTAGAGCGTGGCTAAGCGCTGCTCTCGCTTATCAATACGATTGCTGGAGCGGACTCAAATACGCAAACGACACACACGCCGTCGGTGAAGCGATGGCGTTTATCGATTCTCTCACAATGCTCTCAAGCAACGCTCTCGCTATGGCGTTTTCGTACGATATATACGGAAATGACACGTCGGCGTGGAAAACACCAACCACCGAGCGTGACGGTTTATGGCAGGTGTCTGGATCGGGAGCAGGATCTGGATTTAAAGGAGAAATCCCATCGAATTTGAAACCGGACGTTACGGTTTGTAAGGGAGGGGGGAAATGTTATAAGACGGTGCAGGAAGCGGTTAACGCTGCGCCTGAAAGTGGTGTTGGCGGGAAGAGGTTTGTTATATACATAAAAGAAGGGAAATATGAAGAAACCGTTAGGGTTCCGTTAGTGAAGAGAAATGTGGTGTTCTTAGGTGACGGAATCGGAAAGACTGTTATAACTGGATCAGCTAACGTGGGGCAGCCCGGAATGACTACTTACAACTCCGCCACAGTCGCTGTTCTTGGAGATGGATTCATGGCAAAGAATCTAACAATAGAAAACACAGCAGGACCTGATGCACACCAAGCAGTTGCGTTCAGATTAGACAGTGATCTTTCTGTAATTGAGAATTGTGAATTCTTAGGTAACCAAGATACTCTTTATGCTCATTCCCTACGCCAATTGTACAAATCATGCCGCATTGAAGGCAACGTGGATTTCATCTTCGGAAACTCAGCTACAATCCTCCAAGACTGTACAGTCCTGGTTCGTCCTAGACAACTGAAGCCAGAGCATGGTGAGAACAATGCCATCACAGCTCAAGGTAGAACCGACCCTGCACAAACTACAGGCTTTGTTTTTCATAACTGTTTGATTAATGGAACTGAAGATTACATGGCATTGTATCGTAGTAAACCTAAAGTACATAAAAACTATTTGGGTAGGCCATGGAAGGAGTATTCTAGAACAGTTTTTATTAATTCGACATTGGAAGTACTTATTACACCTGAGGGTTGGATGCCATGGAATGGTGACTTTGCACTTCAGACACTTTATTATGGTGAATATGGGAATTCTGGAGCTGGTTCTGATTTGTCTAAGAGAGTGTCTTGGAGTAGTAAAATCCCTGCTGAACATGTTGGCAGTTTTTCAGTGGAGAATTTCATTCAAGGAGATTTTCTCACCTCTGCTACAAATTCAAACAATGGAAGAAAGCTACAAATTCAAATATTGAAAGAAATATGTTTGTTACTGATATTATTTGTTACAACATAG 1713 0.446 MASSLFTFSLFIFFTLSSASHHHHQSPTPAPTPTHTGSASAASEIQQACKATRFPQQCESSLTNLTTNPTTVQLIQTAISHSSEKLVTALSMVKEILKTSSDSQNRTVASTTCIETLTNSQYRISTSNEALENGKIKDARAWLSAALAYQYDCWSGLKYANDTHAVGEAMAFIDSLTMLSSNALAMAFSYDIYGNDTSAWKTPTTERDGLWQVSGSGAGSGFKGEIPSNLKPDVTVCKGGGKCYKTVQEAVNAAPESGVGGKRFVIYIKEGKYEETVRVPLVKRNVVFLGDGIGKTVITGSANVGQPGMTTYNSATVAVLGDGFMAKNLTIENTAGPDAHQAVAFRLDSDLSVIENCEFLGNQDTLYAHSLRQLYKSCRIEGNVDFIFGNSATILQDCTVLVRPRQLKPEHGENNAITAQGRTDPAQTTGFVFHNCLINGTEDYMALYRSKPKVHKNYLGRPWKEYSRTVFINSTLEVLITPEGWMPWNGDFALQTLYYGEYGNSGAGSDLSKRVSWSSKIPAEHVGSFSVENFIQGDFLTSATNSNNGRKLQIQILKEICLLLILFVTT* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0833 570 Pfam Plant invertase/pectin methylesterase inhibitor 44 186 IPR006501 GO:0004857
Tpr3g0833 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 186 IPR035513 -
Tpr3g0833 570 SUPERFAMILY Pectin lyase-like 230 544 IPR011050 -
Tpr3g0833 570 CDD PMEI-like_3 48 186 - -
Tpr3g0833 570 Gene3D - 227 549 IPR012334 -
Tpr3g0833 570 Pfam Pectinesterase 233 538 IPR000070 GO:0030599|GO:0042545
Tpr3g0833 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 189 IPR035513 -
Tpr3g0833 570 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 15 538 - -
Tpr3g0833 570 PANTHER PECTINESTERASE 15 538 - -
Tpr3g0833 570 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 186 IPR006501 GO:0004857
Tpr3g0833 570 SMART PMEI_2 40 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0833 Tpr-Chr3 7876227 7880810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0833 38 538 Carbohydrate Esterase AT5G09760 62.992 0.0 681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0833 3 7876227 7880810 Tpr3g0833 3 7876227 7880810 ECH
Tpr3g0833 3 7876227 7880810 Tpr3g3136 3 34581796 34584519 PCT