Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0831 ATGGAAAATAACCAAAATAATAATAGTAGTAGTACTAGTGCATTCACAAGCACTTGGAATCTTGAGAAAATGGAAACAAATGAACAAAACCGTATTATTCTCCAACAAGATCATCATCAAATTCCTATGAGTTCTTCTTTGATTTGGCCACAAAATAACTACAACAACATGATGATACCACCACCACCACCACCGTTGCCTCCGCCATCTTCATCGGGTTCTCTAAGTGACATATTAGGGATCCACCAAATTGATCAAGATGTTGAAGAACAAGAAGAAGAGTTAGGAGCTATGAAGGAAATGATGTACAAGATTGCAGCTATGCAACCGGTGGATATCGATCCTGCAACTATTCGAAAACCAAAGCGAAGAAACGTTCGAATCAGCGACGATCCACAAAGTGTTGCAGCTAGACATAGAAGAGAAAGAATTAGTGAGAAGATTCGTATCCTTCAAAGACTTGTTCCTGGTGGAACTAAAATGGATACAGCTTCTATGCTTGATGAAGCCATTCGTTATGTTAAGTTCTTAAAGAGACAAATTAGGTTGCTTCAATCCACTCCTCAAAATCATCATCATCAACAAAATCAATTACCATTTTCATCACAATGCATTAACTCTACTCCTCCAAGTGCTTTGTTATTGTCCCCTTCTTCCGGTTGTGACGCTTGGCCTTTTGCACCAAATTTACTACTCACTTCTGCGACAACCGCAACGGCCGACTTGCCCGCCGGAGTTCAATTTGATGCCGGAGGACATTCACATTCACATGCTTGTGATGGCTCATCAAGCTTTAACCATCATGAGGTAATTAGTGAGTAA 822 0.4015 MENNQNNNSSSTSAFTSTWNLEKMETNEQNRIILQQDHHQIPMSSSLIWPQNNYNNMMIPPPPPPLPPPSSSGSLSDILGIHQIDQDVEEQEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSTPQNHHHQQNQLPFSSQCINSTPPSALLLSPSSGCDAWPFAPNLLLTSATTATADLPAGVQFDAGGHSHSHACDGSSSFNHHEVISE* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0831 273 Coils Coil 81 101 - -
Tpr3g0831 273 Gene3D - 131 199 IPR036638 GO:0046983
Tpr3g0831 273 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 15 260 - -
Tpr3g0831 273 CDD bHLH_AtIND_like 129 186 - -
Tpr3g0831 273 Pfam Helix-loop-helix DNA-binding domain 138 177 IPR011598 GO:0046983
Tpr3g0831 273 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 128 177 IPR011598 GO:0046983
Tpr3g0831 273 SMART finulus 134 183 IPR011598 GO:0046983
Tpr3g0831 273 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 15 260 IPR045843 GO:0003700|GO:0006355
Tpr3g0831 273 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 198 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0831 Tpr-Chr3 7851923 7853355 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0831 97 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 83.146 1.07e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr3g0831 HLH 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0831 - - aprc:113856609 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0831 3 7851923 7853355 Tpr3g0831 3 7851923 7853355 ECH