Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0820 ATGCCGGCGTGGTGGAGTAGAAAGTCATCAAAGAACAAACAAGAGCGTGATATTCATAATGATGAAGAAGATGAAGAAGAACAATCACGTTCTGGTTCTGGTACTGCTGGTGTTCTTCAATTCAATTTCATGAAATCACCAATCAACGCAATAAGAAACAACAACAACAACAACAACAACGGTGATAGTATTAAGAAGAAGGATAAGAAGAAAAACTCAAAGCCGAAGAGTTTTGATGAAGTTTTCAATCGGAATTCACCGAGGACTAGTAGAGAATTTGATGGCGGCGCCGCCACTCAAAACAAAGGACTTCCGTTACCTTTACCTGTTAACACCGATCAAGGATCTCTTTCCGGTTCTGGTTCTAGCGTTAGTTCTTCTACCTCTTTTGGTGATCATCCAATCTCTCCTCAATTCACTTCCAACAATAGAGGACAAGATGAGGTGAAGTTCAATGTAAGGCCAAAAAGTCCTGGTCCTGCATCAAGAGGACCCACTAGTCCTACATCACCTCTTCATCCAAGGTTGCAGCAGGCTCTGAGTCTTGACTCACCTACGGGAAAGCAAGACGAAGGAAGGAGTCAATGTCATCCATTGCCTCTTCCACCGGGATCTCCTACTAGTCCTTCTTCTGCTCTTTCAAACACACGGCCAAATGGACCGTTTGAAAATCCTGTCCCTAACCTGTCCAAGTGGAAGAAAGGAAAGCTTCTTGGCCGGGGAACATTTGGTCATGTTTATCTGGGATTTAATAGTGAAAATGGGCAAATGTGTGCAATAAAAGAGGTCAGGGTTGGCTGTGATGATCAAAATTCAAATGAGTGCCTCAAACAACTTAACCAGGAGATAAATTTGCTTAATCAGCTTTGTCATCCAAACATTGTTCAATACTATGGAAGTGAACTGGGAGAGGAGTCACTTTCTGTTTATTTGGAATTTGTCTCTGGTGGTTCTATCCATAAACTACTTCAGGAATATGGCCCGTTCAAGGAGCCTGTTATTCAAAATTACACCAGGCAGATTGTCTCTGGACTTGCTTATTTACATGCAAGGAATACAGTACACAGGGATATCAAAGGGGCTAACATACTAGTTGATCCTAATGGTGAAATCAAACTAGCAGACTTTGGAATGGCTAAACATATAACTAATGCTGCTTCAATGCTTTCATTCAAAGGAAGTCCGTACTGGATGGCACCTGAGGTTGTAATGAACGCAAATGGCTATAGCCTTGCAGTTGATATATGGAGCTTGGGATGCACACTTATTGAAATGGCAGCATCGAAACCTCCGTGGAGTCAGTATGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCAAAGATATGCCTGAAATTCCTGAACATCTTTCAAATGATGCGAAGAATTTCATTATGTTATGTTTACAGCGGGACCCATCAGCTCGCCCAACAGCCCAGAAATTACTAGAGCACCCATTCATTAGAGATCAATCAGCAACAAAAGCTGCAACCAGAGATGTTTCCTCTTACATGTTTGATGGAACAAGAACACCGCCTGTTTTAGAGCCCCATTCAAATCGAAGAAGTATAACTTCACTTGATGGAGACTATGCAACAAAGTCAGCTATTGCAGCTCCACGTGCAGTAAGGAGTCCAAGAGATCACACAAGAATGATCACATCTTTACCGGTATCTCCCTCTTCAAGTCCATTGCGACAGTATGGAACGGATCAAAGGAGCTGTTTCTATTCTCCTCCTCATCCATCTTACACAATAATGGGACAAAATAGTTACACTTTGAATGACACACCCTCTTATCCAGTGAGATCAAATGCAACATTTACTCTTGATCCATGGCATGAAACATCCAGATACAAAGCCCCCACACCACCTGGTGGGTCCCCAAGAATGAGATTCATTTGA 1905 0.4231 MPAWWSRKSSKNKQERDIHNDEEDEEEQSRSGSGTAGVLQFNFMKSPINAIRNNNNNNNNGDSIKKKDKKKNSKPKSFDEVFNRNSPRTSREFDGGAATQNKGLPLPLPVNTDQGSLSGSGSSVSSSTSFGDHPISPQFTSNNRGQDEVKFNVRPKSPGPASRGPTSPTSPLHPRLQQALSLDSPTGKQDEGRSQCHPLPLPPGSPTSPSSALSNTRPNGPFENPVPNLSKWKKGKLLGRGTFGHVYLGFNSENGQMCAIKEVRVGCDDQNSNECLKQLNQEINLLNQLCHPNIVQYYGSELGEESLSVYLEFVSGGSIHKLLQEYGPFKEPVIQNYTRQIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHITNAASMLSFKGSPYWMAPEVVMNANGYSLAVDIWSLGCTLIEMAASKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKNFIMLCLQRDPSARPTAQKLLEHPFIRDQSATKAATRDVSSYMFDGTRTPPVLEPHSNRRSITSLDGDYATKSAIAAPRAVRSPRDHTRMITSLPVSPSSSPLRQYGTDQRSCFYSPPHPSYTIMGQNSYTLNDTPSYPVRSNATFTLDPWHETSRYKAPTPPGGSPRMRFI* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0820 634 SMART serkin_6 232 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0820 634 MobiDBLite consensus disorder prediction 31 61 - -
Tpr3g0820 634 MobiDBLite consensus disorder prediction 62 78 - -
Tpr3g0820 634 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 615 - -
Tpr3g0820 634 MobiDBLite consensus disorder prediction 200 228 - -
Tpr3g0820 634 MobiDBLite consensus disorder prediction 1 148 - -
Tpr3g0820 634 MobiDBLite consensus disorder prediction 208 223 - -
Tpr3g0820 634 Pfam Protein kinase domain 233 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0820 634 CDD STKc_MEKK1_plant 231 488 - -
Tpr3g0820 634 SUPERFAMILY Protein kinase-like (PK-like) 230 567 IPR011009 -
Tpr3g0820 634 MobiDBLite consensus disorder prediction 105 148 - -
Tpr3g0820 634 MobiDBLite consensus disorder prediction 9 30 - -
Tpr3g0820 634 ProSiteProfiles Protein kinase domain profile. 232 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0820 634 PANTHER MAP KINASE KINASE KINASE 1 615 - -
Tpr3g0820 634 Gene3D Transferase(Phosphotransferase) domain 1 229 512 - -
Tpr3g0820 634 MobiDBLite consensus disorder prediction 79 96 - -
Tpr3g0820 634 ProSitePatterns Protein kinases ATP-binding region signature. 238 261 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0820 Tpr-Chr3 7697408 7702553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0820 1 547 MAP Kinase Kinase Kinase AT1G53570 54.514 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr3g0820 Pkinase 6.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0820 K04421 - gmx:100787064 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0820 3 7697408 7702553 Tpr3g0820 3 7697408 7702553 ECH
Tpr3g0820 3 7697408 7702553 Tpr3g3150 3 34734498 34740537 PCT