Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0816 ATGGCTGTTTTGAAAAACACAACATTAGATGAAATGGTGTGTTATTCACCAACTATGATAACAACAAATGGGATATGGCAAGGAGATAACCCTTTGGACTATGCTCTTCCTCTCTTCATCCTACAAGTTATTTTAGTTGTTATTGCCACACGTATCTTCGTTTTCATACTCAAGCCCATTCGTCAACCACGCGTCATAGCTGAAATCTTGGGAGGGATAGTATTGGGTCCTTCTGTTCTCGGACGAAACAAAGCATTTGCAGAAGCAGTTTTTCCATTAAGAAGTGTGATGGTGATTGAAACAATGGCAAATGTTGGTCTTTTGTATTTTCTATTCTTGGTTGGAGTAGGGATGGATGCATCTTCATTACGACGCATTGGTAAAAAATCATTTACTATAGCAATTGCAGGAATGATATTACCATTTGGAACTGGAGCACTATTTTCCATTTTTTGGTTGAGAAATGATGGGGATGAAAATACTACAGCTTTTATCCTATTGCTTGGTGTTATTCTTTCGGTCACTGCGTTTCCTGTTCTTGCTAGGATCCTCGCCGAACTAAAACTAATCAACTCAGAGTTGGGAAGAGTTGCTCTTTCATCTGCACTTATTAATGATGTTCTATCATGGGTACTTTTGGCTATTGCAATTGCTTTGGCAGAGAATGAAAGAGTGACATTTGCATCTTTAATGGTTGTATTGTCAAGTGCAGCATTTGTTGCTTTTAATGCTTTTGTTGTAAGACCGATAATTATGTGGATAATAAGAAAAACACCAGAAGGTGAATCATTCAGTGACTTCTATATATGTTTGATACTAGCAGGTGTGATGATCTCAGGTTTTATCACTGATGCTATTGGAACTCATTCTGTTTTTGGAGCTTTTGTGTTTGGTTTGATCATCCCAAGTGGTCCACTTGGTTATGCTCTTATTGAAAAGCTTGAGGATTTTGTTTCTGGCCTTCTACTTCCTCTATTTTTTGCAATCAGTGGATTAAAGACTAATGTTGGACTCATCAATGGTTTTTCTACATGGGCAATTTTAATCATTCTTGTTGTATTGGCTTGTGTTGGTAAAGTGGCTGGAACTTTAATTATTGCTCTTAGTTATCAAATGTCATTAACCGAAGGTGCTGCACTTGGCATGCTTATGAACACGAAAGGCCTTGTGGAAATTCTTGTTCTTAACATTGGTAGGGATCAAAAGGTTTTGGATGAAGGGTCATTTGCAACTATGGTAGTTATAACTATAATGATGACTAGCGTGATTGTACCTGGAATATCAATTATATATAGACCATCGAGGGGAATGATATCCTACAAAAGAAGAACAGTTCAAATGTCCAAAAAAGATACTGAGTTTAGAGTATTAGTGTGTATTCATACCCCTAGAAATGTTCCAACAATGATCAACCTTCTTGAAGCCTCTAATCCATCAAAAAAGTCACCAATATGTGTATATGTGCTCCATTTGGTTGAACTTACCGGTCGAACATCTGCATTACTCATTGTTCATACCTCTAGAAAATCAGACAACCCTACTCTCAACAGAACTGAAGCTCAATCTGATCACATAATCAACGCCTTTGAAAACTACGAACAACACACCGAACATGTATCAGTCCAACCTTTAACAGCAATCTCCCCATACTCCACAATGCATGAAGATATATGCAATTTAGCTGAGGAAAAGCGTGTTGCATTTATAATCATCCCTTTTCATAAACAGCAAACAGTTGACGGAGGGATGGAAGCAACGAACATGGCATTTCGAACTGTTAACCAAAATGTATTAGCGAATTCGCCTTGTTCTGTTGGAATTCTAGTAGATAGAGGATTAAATAGTTCAAACCGTTTAGTTGCTGATCAAATGTCTCATCATGTAGCAGTTTTGTTTTTTGGTGGAGCAGATGATAGGGAAGCGTTAAGTTACGGTTGGAGAATGTCAGAACATTCTGGAATAAGTCTAACAGTTATGCGTTTCGTTCCCGGAGAAGACATAATGATGATGAAAGATAATGCCAACAATCAAGAGAAACAAAGAGTGTTAGATGTTGAAACAGATGAAAATAATAATGAGAAACAACTTGATGAGAAGTTTTTGCATTGGTTTATGATGTGTCATGTGAATGATGATTCAATTGCATATATTGAGAAAGTAGTTAATAATGGAGAGGAAACAGTTGGTGCTATAAGGTCAATGGGTGATGTTTTTGGGCTTTTTATTGTAGGAAGAGGACAAGGAAATATATCACCACTTACAGCAGGACTCACTGATTGGAGTGAGTGTCCTGAATTAGGAGCTATTGGTGATTTGTTAGCATCTTCTGATTTTGCAACAATTGCTTCAGTTTTGGTAGTTCAACAATATGTTGGTGTTGGTTCGGAAGATGGATTAGGAACACCAGTGTTAACAAACGAAGATTATGTTAATCATCATTCATCAGTTACCCCACCAAGGGGTCATCAAACTGTATTTAATACATAA 2487 0.3723 MAVLKNTTLDEMVCYSPTMITTNGIWQGDNPLDYALPLFILQVILVVIATRIFVFILKPIRQPRVIAEILGGIVLGPSVLGRNKAFAEAVFPLRSVMVIETMANVGLLYFLFLVGVGMDASSLRRIGKKSFTIAIAGMILPFGTGALFSIFWLRNDGDENTTAFILLLGVILSVTAFPVLARILAELKLINSELGRVALSSALINDVLSWVLLAIAIALAENERVTFASLMVVLSSAAFVAFNAFVVRPIIMWIIRKTPEGESFSDFYICLILAGVMISGFITDAIGTHSVFGAFVFGLIIPSGPLGYALIEKLEDFVSGLLLPLFFAISGLKTNVGLINGFSTWAILIILVVLACVGKVAGTLIIALSYQMSLTEGAALGMLMNTKGLVEILVLNIGRDQKVLDEGSFATMVVITIMMTSVIVPGISIIYRPSRGMISYKRRTVQMSKKDTEFRVLVCIHTPRNVPTMINLLEASNPSKKSPICVYVLHLVELTGRTSALLIVHTSRKSDNPTLNRTEAQSDHIINAFENYEQHTEHVSVQPLTAISPYSTMHEDICNLAEEKRVAFIIIPFHKQQTVDGGMEATNMAFRTVNQNVLANSPCSVGILVDRGLNSSNRLVADQMSHHVAVLFFGGADDREALSYGWRMSEHSGISLTVMRFVPGEDIMMMKDNANNQEKQRVLDVETDENNNEKQLDEKFLHWFMMCHVNDDSIAYIEKVVNNGEETVGAIRSMGDVFGLFIVGRGQGNISPLTAGLTDWSECPELGAIGDLLASSDFATIASVLVVQQYVGVGSEDGLGTPVLTNEDYVNHHSSVTPPRGHQTVFNT* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0816 828 Gene3D - 38 434 IPR038770 -
Tpr3g0816 828 PANTHER CATION/H + ANTIPORTER 8 819 - -
Tpr3g0816 828 PANTHER CATION/H+ EXCHANGER 3 8 819 - -
Tpr3g0816 828 Pfam Sodium/hydrogen exchanger family 45 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0816 Tpr-Chr3 7678268 7680991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0816 1 812 Antiporter Super Family AT2G13620 65.892 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0816 - - adu:107480185 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0816 3 7678268 7680991 Tpr3g0816 3 7678268 7680991 ECH