Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0815 ATGATGGGAAGTGAAAGTAGTGTAAATCTTCCTCCTGGGTTTTACTTTTCTCCAACAGATGAAGAATTAATCCTTCACTTTCTATATTCCAAGGCTTCTTTACCATATCATCCTAACATCATACCTCAACTTCACTTGTCTCAACATCATCCTTGGGAACTATACGGTAAATCGTTGTCGAGTGGAAATCAGCACTACTTTTTCACCGAAGTGAAGGAAAATAGAAGCACTGAAAATGGATATTGGAAGGAAATTGGGGTCACAAAACCTATAAATAATTTGGGAATGAAGAAGTACCTTGTGTTCATCCTTGGAGAAGGAACTGAAACCAATTGGGTAATGGAAGAGTATCATATTTCCTCATATGAATCTAGGAGAAGTCAAAATCAGGATGAGAGTTGGAGCAAATGGGTTTTATGCAAAGTTTATGAAAAGAATGTGTCACAAGAAGGTGCAAGTTATAGTGATGAGGATATTGATGATAATGGAACAGAGGTATCATGGCTAGATGAAGTTTTTATGTCCTTGGATGATGATGATCTTGATCAAACAAGCCTACCTAATTATTAG 570 0.3667 MMGSESSVNLPPGFYFSPTDEELILHFLYSKASLPYHPNIIPQLHLSQHHPWELYGKSLSSGNQHYFFTEVKENRSTENGYWKEIGVTKPINNLGMKKYLVFILGEGTETNWVMEEYHISSYESRRSQNQDESWSKWVLCKVYEKNVSQEGASYSDEDIDDNGTEVSWLDEVFMSLDDDDLDQTSLPNY* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0815 189 PANTHER NAC TRANSCRIPTION FACTOR 56 4 183 - -
Tpr3g0815 189 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 4 183 - -
Tpr3g0815 189 Gene3D NAC domain 19 149 IPR036093 GO:0003677|GO:0006355
Tpr3g0815 189 SUPERFAMILY NAC domain 6 145 IPR036093 GO:0003677|GO:0006355
Tpr3g0815 189 Pfam No apical meristem (NAM) protein 11 119 IPR003441 GO:0003677|GO:0006355
Tpr3g0815 189 ProSiteProfiles NAC domain profile. 10 145 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0815 Tpr-Chr3 7675296 7677148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0815 1 146 NAC Transcription Factor Family AT1G77450 37.888 2.34e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr3g0815 NAM 4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0815 - - mtr:MTR_8g093790 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0815 3 7675296 7677148 Tpr3g0815 3 7675296 7677148 ECH