Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0811 ATGGAAAATAATGTTGAAGAGCATGTGCAGATGGATGAATCTGTTGCCTCTATGGAGGGACTAGAAGACTCGTCAGTTGGAGTAAGTCGTGATGAAGCACCATGTGACACCACTGACGATGATGCCATTAGTGTTGAGGCTAGTGAAGGCACCGGAATTTTTTTAAATATTGATAGTATGGAGGATATTCTTAGCTTGAACCTGAAGGGGTTAAGTCCCCATGAGACAAGGAAATTTCAGTTTTCAAGCTTGGAAATGGCTTATGAGTTCTACAACCGGTATGCTAGAATGAATGGGTTTGCAGTCCGCAAGAGCAAGATCCTCTATAGCAAGAAAGGGGAAATATTACAACGAACGTTTGTATGCCATAGAGAAGGGTTTAGGGAGGATAGAGGTTTAACAATAGAAAATCGTAAGCGCGAGCGTAAACCCGAGACTCGGTCTGGATGTGACGCGAAATTTAGAGTTCATATAGATACTTTATCACAACGTTGGCAGATAACTGTTTTTACAAATCAACATAACCATGAACTTTTGGATGAAAAGTACTGTGTAATGCTTCCTGCACATCGAAGAATGAAAGAGTCAGATACAGTGCAGATGAACGATATGTTGAAGGGTGGTATAGGTCCGTCTCAATTCTATGCTTCTATGGCGAACCAAGCAGGAGGTTATGAAAACATAGGGTTTCGTAGGAAGGATTTATATAATCAGATAGGAAAGCAACGCCGTTTGAAACATTGTGATGGTAAAAATGCTTTACATTATCTTCGTGGGCTGGCATCCGATGACCCGATGATGTTTTATCGCCACACCGTCGATGGCGAAGGTAGGCTTGAACACCTGTTTTGGTGTGATGGTATTAGCCAAATGGATTACCAAGTTTATGGGGATGTGTTGGCATTTGATGCAACCTATGGAAGGAATAAATATCACTGCCCCTTAGTGGTGTTTTGTGGTGTTAATAACCACAATAACAATGTTATATTTGCCGGTGCTATTGTTGCAAATGAAAAAGAAGAAACTTATGTGTGGGTTCTTGAACAATTTTTGAAAGCAATGTCAGGCAAGTCGCCTGTATCTGTCATTACTGATGGCGATCTTGCAATGAAGAATGCTATTAAAAGGGTATTTCCGAATGCATATCATAGATTGTGTGCTTGGCACCTAATTCGTAATGCAACGTCTAACATTGGAGTTCCTGAATTTGTCGGTCAATTCAGGAAATGCATGTTGAGGGACTATGACCTGGGTGAGTTTCGACGCAAGTGGACTGAAATGGTTGACACATTTGGGTTGCATGAAAACAAGTGGGTTACAGATCTTTATGCAAAGAGAAAGATGTGGGCTACAGCTCATATACGTGGAAATTTTTTTGCTGGGTTTAGAACTACCTCCCGGTGTGAGGGGTTACATTCAGAAATTGGCAAGTTTCTTCACTCACGATATAATTTGAGTGATTTTTTACTACATTTTCATCGATGCCTTAATTACATGCGTTATAAGGAGGTTGAAGCCGACTTTGCTTCTAATTACGGTGATACTGTTCTACAAACAAGATTTCGAAGCATGGAGAGCTGTGCCGAGAAGTTATTTACTAGGGAAATATTCTTTATATTTCGTGAATTTCTTGCACGGTCTGCAGAGATGGTTGTGACAGCAAGCAATCAAACTTACACGTGCTTCATATACACGGTTTGTAAGTACCAGGCATCTAAACGGGAGTGGAACGTATCATTTTATCCGGATGATAATGTGTTTAAATGTTCTTGCAAAAAGATGGAATCATTTGGCCTCCCATGTGAGCATATTATTGCAGTATTGGTTTTCTTAGATGTTGCAGAATTGCCAAATACTTTGGTAGCAGCTAGGTGGACAAAGAATGCAAAGGAAGCAATATGTAGCACAAATAAGAATCTTCCGAAATATTGGGATTCACATAAGTCGTCTAGATATAGTGCTCTTATGTTTCGATATATGCGTTTGAGCAAATTAGTAAGTGAGAGTGGTGATGATTTCAATTATCATATGGAACAGGCTGCTGCTGATATTCATAAGATGGAAACAAAGAGGGGCTTACATGATGATGGTGGAGCCACAAATTCAGGTCAAACTGACCATGAGATATTGAGGGATCCTGCTCCAGTTAGAAGTAAAGGATGTGCCGGTGTATCTTCATCATCTACTCGGAAGAAAAGGAAGCCGGGTCAGTGTACTGTTTGTAAAGAGTATGGGCATAATAAGCAAACATGTGAAATACGTCGACATCGTGCTAACAAGACACACTCGGCAGATGCAGATCGTCACAACAATGACTTCAGTGATGACTCTTTGCATAATGATCTTGACTGA 2352 0.4043 MENNVEEHVQMDESVASMEGLEDSSVGVSRDEAPCDTTDDDAISVEASEGTGIFLNIDSMEDILSLNLKGLSPHETRKFQFSSLEMAYEFYNRYARMNGFAVRKSKILYSKKGEILQRTFVCHREGFREDRGLTIENRKRERKPETRSGCDAKFRVHIDTLSQRWQITVFTNQHNHELLDEKYCVMLPAHRRMKESDTVQMNDMLKGGIGPSQFYASMANQAGGYENIGFRRKDLYNQIGKQRRLKHCDGKNALHYLRGLASDDPMMFYRHTVDGEGRLEHLFWCDGISQMDYQVYGDVLAFDATYGRNKYHCPLVVFCGVNNHNNNVIFAGAIVANEKEETYVWVLEQFLKAMSGKSPVSVITDGDLAMKNAIKRVFPNAYHRLCAWHLIRNATSNIGVPEFVGQFRKCMLRDYDLGEFRRKWTEMVDTFGLHENKWVTDLYAKRKMWATAHIRGNFFAGFRTTSRCEGLHSEIGKFLHSRYNLSDFLLHFHRCLNYMRYKEVEADFASNYGDTVLQTRFRSMESCAEKLFTREIFFIFREFLARSAEMVVTASNQTYTCFIYTVCKYQASKREWNVSFYPDDNVFKCSCKKMESFGLPCEHIIAVLVFLDVAELPNTLVAARWTKNAKEAICSTNKNLPKYWDSHKSSRYSALMFRYMRLSKLVSESGDDFNYHMEQAAADIHKMETKRGLHDDGGATNSGQTDHEILRDPAPVRSKGCAGVSSSSTRKKRKPGQCTVCKEYGHNKQTCEIRRHRANKTHSADADRHNNDFSDDSLHNDLD* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0811 783 Pfam SWIM zinc finger 588 608 IPR007527 GO:0008270
Tpr3g0811 783 MobiDBLite consensus disorder prediction 690 783 - -
Tpr3g0811 783 MobiDBLite consensus disorder prediction 1 31 - -
Tpr3g0811 783 SMART 26again6 587 614 IPR006564 GO:0008270
Tpr3g0811 783 MobiDBLite consensus disorder prediction 747 783 - -
Tpr3g0811 783 Pfam FAR1 DNA-binding domain 89 179 IPR004330 -
Tpr3g0811 783 ProSiteProfiles Zinc finger SWIM-type profile. 576 612 IPR007527 GO:0008270
Tpr3g0811 783 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 78 691 IPR031052 GO:0006355
Tpr3g0811 783 Pfam MULE transposase domain 299 393 IPR018289 -
Tpr3g0811 783 PANTHER OS03G0181600 PROTEIN 78 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0811 Tpr-Chr3 7638293 7642490 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g0811 MULE 1.8e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0811 - - ccaj:109791994 715.301