Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g0809 | ATGAAACTGTTTTGTTACAATATTGAGCTTGCAAAAGAGTGGCCGGGCTTACCAAAAGGTGTTAAATTTGATCCATCTGATAAGGAGATAATTTGGCACTTGCTTGCAAAAGTTGGTGTAGGAAATTTACAACCTCATCCTTTCGTAGAAGAGTTTATTATTACTCTTGAAGTGGATGATGGAATTTGTTACACTCATCCTCAAAACTTACCTGGTGTAAAGCAAGATGGAAATGCAACCCACTTTTTCCACAGAGCAATTAAGGCTTACAATACTGGCACACGAAAGCGCCGAAAAATACATGATCAGGATTTTGGTGATGTCCGCTGGCATAAAACTGGAAGAACTAAACCAGTAATCTTGAATGGGGCTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATATGAGCAGTGCGGGGGGAGGAAAAGCTGAGAAAACGAATTGGGTTATGCATCAATATCATTTAGGAACAGAAGAGGATGAAAAAGACGGGGAATTTGTTATCTCTGAAGTGTTTTACCAGCAGCAGCATGTCAAATTGGGTGATATAGATGAACAGGATATAACTGAAGCCACCGAAGAAACAATCATAAAAGTGGATCCGGTTACTCCCAAATCGGTGACTCCTGAGCCTCCTCACAATGAAAGGCAGTATTCAGATGTTGATCTAGGATAA | 678 | 0.3982 | MKLFCYNIELAKEWPGLPKGVKFDPSDKEIIWHLLAKVGVGNLQPHPFVEEFIITLEVDDGICYTHPQNLPGVKQDGNATHFFHRAIKAYNTGTRKRRKIHDQDFGDVRWHKTGRTKPVILNGAQKGCKKIMVLYMSSAGGGKAEKTNWVMHQYHLGTEEDEKDGEFVISEVFYQQQHVKLGDIDEQDITEATEETIIKVDPVTPKSVTPEPPHNERQYSDVDLG* | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g0809 | 225 | MobiDBLite | consensus disorder prediction | 202 | 225 | - | - | |
Tpr3g0809 | 225 | ProSiteProfiles | NAC domain profile. | 17 | 175 | IPR003441 | GO:0003677|GO:0006355 | |
Tpr3g0809 | 225 | SUPERFAMILY | NAC domain | 4 | 175 | IPR036093 | GO:0003677|GO:0006355 | |
Tpr3g0809 | 225 | Gene3D | NAC domain | 26 | 180 | IPR036093 | GO:0003677|GO:0006355 | |
Tpr3g0809 | 225 | PANTHER | SUPPRESSOR OF GAMMA RESPONSE 1 | 7 | 223 | - | - | |
Tpr3g0809 | 225 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 73 | 7 | 223 | IPR044799 | GO:0003700 | |
Tpr3g0809 | 225 | Pfam | No apical meristem (NAM) protein | 18 | 156 | IPR003441 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr3g0809 | Tpr-Chr3 | 7634618 | 7636790 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr3g0809 | 12 | 185 | NAC Transcription Factor Family | AT1G28470 | 58.857 | 1.33e-70 | 216 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Tpr3g0809 | NAM | 2e-21 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g0809 | - | - | gmx:100799488 | 380.948 |