Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0809 ATGAAACTGTTTTGTTACAATATTGAGCTTGCAAAAGAGTGGCCGGGCTTACCAAAAGGTGTTAAATTTGATCCATCTGATAAGGAGATAATTTGGCACTTGCTTGCAAAAGTTGGTGTAGGAAATTTACAACCTCATCCTTTCGTAGAAGAGTTTATTATTACTCTTGAAGTGGATGATGGAATTTGTTACACTCATCCTCAAAACTTACCTGGTGTAAAGCAAGATGGAAATGCAACCCACTTTTTCCACAGAGCAATTAAGGCTTACAATACTGGCACACGAAAGCGCCGAAAAATACATGATCAGGATTTTGGTGATGTCCGCTGGCATAAAACTGGAAGAACTAAACCAGTAATCTTGAATGGGGCTCAAAAAGGCTGTAAAAAGATTATGGTTCTGTATATGAGCAGTGCGGGGGGAGGAAAAGCTGAGAAAACGAATTGGGTTATGCATCAATATCATTTAGGAACAGAAGAGGATGAAAAAGACGGGGAATTTGTTATCTCTGAAGTGTTTTACCAGCAGCAGCATGTCAAATTGGGTGATATAGATGAACAGGATATAACTGAAGCCACCGAAGAAACAATCATAAAAGTGGATCCGGTTACTCCCAAATCGGTGACTCCTGAGCCTCCTCACAATGAAAGGCAGTATTCAGATGTTGATCTAGGATAA 678 0.3982 MKLFCYNIELAKEWPGLPKGVKFDPSDKEIIWHLLAKVGVGNLQPHPFVEEFIITLEVDDGICYTHPQNLPGVKQDGNATHFFHRAIKAYNTGTRKRRKIHDQDFGDVRWHKTGRTKPVILNGAQKGCKKIMVLYMSSAGGGKAEKTNWVMHQYHLGTEEDEKDGEFVISEVFYQQQHVKLGDIDEQDITEATEETIIKVDPVTPKSVTPEPPHNERQYSDVDLG* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0809 225 MobiDBLite consensus disorder prediction 202 225 - -
Tpr3g0809 225 ProSiteProfiles NAC domain profile. 17 175 IPR003441 GO:0003677|GO:0006355
Tpr3g0809 225 SUPERFAMILY NAC domain 4 175 IPR036093 GO:0003677|GO:0006355
Tpr3g0809 225 Gene3D NAC domain 26 180 IPR036093 GO:0003677|GO:0006355
Tpr3g0809 225 PANTHER SUPPRESSOR OF GAMMA RESPONSE 1 7 223 - -
Tpr3g0809 225 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 7 223 IPR044799 GO:0003700
Tpr3g0809 225 Pfam No apical meristem (NAM) protein 18 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0809 Tpr-Chr3 7634618 7636790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0809 12 185 NAC Transcription Factor Family AT1G28470 58.857 1.33e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr3g0809 NAM 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0809 - - gmx:100799488 380.948