Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0808 ATGCAACAAATGAAAATGCAAGGCTGTGAAGTTGAAGCCATTGGCATAAACTACAAAATCCACACAAACAAAACAGAACACCCCTTTAAAATCTTCAGCAAATCTCCACAACTAGATAATGCCAATGGTCAAGAAATAGAAGAGGAAGAAGCTAGAGTTGAAAAAAGTTGCAGTGGAGTTAGGCATGTGCTCAAGAATGTGAGTTTTCAGGCAAGACCATGGGAAATCCTAGCAATTGTTGGACCAAGTGGAGCTGGAAAGTCATCACTACTTGAGATCTTAGCAGGTAAACACAGTCCACAAAGAGGGTCAGTGTTGTTGAACCAAAAGCCTGTTGACAAATCTCAGTTCAGAAAGCTATCAGGTTATGTTACTCAAAAGGACACTTTGTTTCCCTTACTTACAGTTGAAGAAACCATGATGTTCAGTGCAAAACTAAGGCTAAAGCTTCCTCAACAACAACTATGTTCAAGGGTCAAGTCATTGATTCAAGAGCTTGGACTTGATCATGTTGCGAGGACTCGAATTGGTGACGATCGAGTCCGAGGTATATCAGGTGGTGAAAGGCGCAGAGTTTCTATTGGTGTTGAAGTCATACATGATCCAAAAGTTTTGATTCTTGATGAACCAACTTCAGGGCTTGATAGTACTTCAGCTTTGCAAATAATTGATATGCTTAAGGTTATGGCTGAAACTAGGGGAAGAACTATAATACTAAGTATTCATCAACCTGGTTTCAGAATAGTGAAGCTGTTCAATTCATTGTTGTTGTTGGCTAATGGTTCTGTGTTACATCATGGAACTGCTGAATTACTGAGTTTGAATTTGAGATTGATGGGTCTAGAGCTTCCACTGCATGTTAATTTAGTTGAATTTGCTATTGATTCCATTGATATCATTCAACAACAACAGCAGCAACAATGTCAGGTGGAAACCGAACCACCAAGACGATTGTTAGGAACAATGCAACAGAAGAAAGGTGGTGATGATGAACAACAACAATCAGGTGAGAGTAAAAGTGGTAAGTTCACTTTGCAACAGCTATTTCAACAATCTAAAGTAATTGATGAAGATATCATCAATAGTACTGGAATGGATTTCTCTTATGATTTTGCAAATTCTAGATTGAGTGAAACTATGATTCTAACTCATAGATTCTCCAAAAACATATTTCGTACAAAAGAGTTATTTGCATGTAGGACAATTCAGATGCTGATTTCAGGACTAGTTTTAGGATCAATCTTTTGTAACCTCAAAGATGATATAAGAGGAACACAAGAAAGGATTGGTCTATTTGCTTTCATATTAACTTTTCTGTTATCAAGCAGCATAGAAGCTCTACCAATTTTTCTACAAGAAAGAGAGATTCTAATGAAGGAAACATCTTGTGGGAGCTACCGTGTATCGTCTTATACTATTGCAAATGGCTTAGTTTACTTGCCATTTCTTCTAATCCTAGCCATTTTGTTCACAGTTCCATTATACTGGCTAGTTGGACTCAACAGAAACTTCACTGCTTTTTTGCACTTTCTGTTACTGATATGGCTTGTTCTTTACACAGCCAATTCAATTGTGGTGTGTTTCAGTGCTCTTGCGCCTAATTTCATTGTTGGGAATTCAATGATTAATGGTGTTATAGGTTCTTTCTTCTTGTTCTCTGGTTACTTCATATCAAACCATGAGATTCCTAGTTACTGGATTTTCATGCATTATATATCACTTTTTAAGTATCCCTTTGAAGGGTTTCTGATCAATGAGTTCTCCAACTCAAAAAAGTGTTTGGAGTACATGTTTGGTGCATGTGTGATGAAGGGAGAGGATGTGCTTAAAGAAGCAGGGTTTGGAGGAGAAAGAAGTAGATGGAAGAATGTTGGTGTCACTGTTTGCTTCATCATGTTTTACAGATTCATTTCTTATGTTATTCTAAGATACAAATGTTCACAGAGAGGTGTTAACAGTGGTAATTCTGTCATTTGA 1977 0.3728 MQQMKMQGCEVEAIGINYKIHTNKTEHPFKIFSKSPQLDNANGQEIEEEEARVEKSCSGVRHVLKNVSFQARPWEILAIVGPSGAGKSSLLEILAGKHSPQRGSVLLNQKPVDKSQFRKLSGYVTQKDTLFPLLTVEETMMFSAKLRLKLPQQQLCSRVKSLIQELGLDHVARTRIGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMAETRGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGTAELLSLNLRLMGLELPLHVNLVEFAIDSIDIIQQQQQQQCQVETEPPRRLLGTMQQKKGGDDEQQQSGESKSGKFTLQQLFQQSKVIDEDIINSTGMDFSYDFANSRLSETMILTHRFSKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDDIRGTQERIGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYTIANGLVYLPFLLILAILFTVPLYWLVGLNRNFTAFLHFLLLIWLVLYTANSIVVCFSALAPNFIVGNSMINGVIGSFFLFSGYFISNHEIPSYWIFMHYISLFKYPFEGFLINEFSNSKKCLEYMFGACVMKGEDVLKEAGFGGERSRWKNVGVTVCFIMFYRFISYVILRYKCSQRGVNSGNSVI* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0808 658 Gene3D - 49 323 IPR027417 -
Tpr3g0808 658 Pfam ABC-2 type transporter 379 587 IPR013525 GO:0016020|GO:0140359
Tpr3g0808 658 SMART AAA_5 73 291 IPR003593 -
Tpr3g0808 658 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524
Tpr3g0808 658 Pfam ABC transporter 64 212 IPR003439 GO:0005524
Tpr3g0808 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 4 645 - -
Tpr3g0808 658 CDD ABCG_EPDR 54 267 - -
Tpr3g0808 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 285 IPR003439 GO:0005524
Tpr3g0808 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 4 645 - -
Tpr3g0808 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 272 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0808 Tpr-Chr3 7630993 7633327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0808 63 272 Calmodulin-binding Proteins AT2G36910 27.315 9.94e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0808 K05681 - gmx:100789722 1048.88