Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0797 ATGCATAATCTTAGAATGGTCAAGATCAAGTCCTATAATAGCAATGGGAATGACTCAAATGTGAGCTTTGATGCGTTTCGATTTCCTGATCATTTAAAATTTCTTTTTTGGGAGGCATTTCCTCAAAAATCTTTGCAGCAAAACTTTTTTTGTCGGGAAAATCTTGTTATACTTGAAATGATTCGTAGCAATCTTGAACAACTTTGGGAGGAGGATCAGGTCTTACCAAGTTTGAAAAAGCTTAACCTTAGCAATTCTATGATGCTGCAAGGATTGCCAGACCTCTATAATTTGTGTCCAAATATCGAAGATGTAATTCTCAGTGGTTGCATAAGTTTGATACATGTTTACTCCTCTAGCTTCCTCAACAACCTTAACAGGTTATGTTTAGATGGTTGTAGTAAACTGGAGAGTGTAATGATTCGTAGCAATATTTTATCAAGATCATCTGGATTAGTTGCTCTCCATGGTTGTCACAATCTTAAAATTCTCTTGTACTGA 501 0.3553 MHNLRMVKIKSYNSNGNDSNVSFDAFRFPDHLKFLFWEAFPQKSLQQNFFCRENLVILEMIRSNLEQLWEEDQVLPSLKKLNLSNSMMLQGLPDLYNLCPNIEDVILSGCISLIHVYSSSFLNNLNRLCLDGCSKLESVMIRSNILSRSSGLVALHGCHNLKILLY* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0797 166 Pfam Leucine Rich Repeat 54 73 IPR011713 -
Tpr3g0797 166 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 139 IPR044974 GO:0006952
Tpr3g0797 166 Gene3D Ribonuclease Inhibitor 1 164 IPR032675 -
Tpr3g0797 166 PANTHER BNAC09G12570D PROTEIN 1 139 - -
Tpr3g0797 166 SUPERFAMILY L domain-like 6 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0797 Tpr-Chr3 7557561 7559168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0797 1 161 WRKY Transcription Factor Family AT4G12020 35.838 1.26e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0797 - - adu:107481402 145.976