Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0791 ATGAAGCAAGGCACCAACGACGCCGAAAACACTGAACACATGTCATCGTTTTCAGATCTCGGACTCTCGGAGCTGATAGTGGACAATTGCCATAATTTGGGGATTCGAACTCCGCGGCCCGTGCAACAACACTGCATCCCGAAGGTTCTAGAAGGGCGTCATGTAATTGGAATCGATGAGACTGGTAGCGGCAAATCGACAGCTTTTGCGCTTTCTATTCTCCACCGCCTCGCCGAGAATCCTACTTTTGCTGCATTTGCTCTCGTTTTGACGCCCACGCGCGATTTTGCTTGTGAACTGGTGGATCAGTTTTTTGCCCTTGGCCACCCGTTCCGCCTCCGCGTTGCTGCGGTTGTGGGTGGTTTTGACATTCGTAGTCAAGCAAAACATTTGCTCACCAGGCCTCACCTTGTTATCGCCACTCCCGGGAGGATCAATGTTTTGCTTCAGAATAATCCTGAAATCGCTGATATGTTTGCTGCGACTAAGTTTCTTGTCTTGGATCAAGCAGACCAACTCCTGGATAATTTTAATGAGGATTTGAAATCTATTTTTCAATACTTACCAAAAAACCGGCAAAATATCTTATTTTCAGCAAACATGACTACTAATATGCAAAAGTTGTGTGACACTTATCAAGAGAAGCCGTATGCCTTTCAAGCTTACGAAGGGAGGGTTTAA 681 0.4611 MKQGTNDAENTEHMSSFSDLGLSELIVDNCHNLGIRTPRPVQQHCIPKVLEGRHVIGIDETGSGKSTAFALSILHRLAENPTFAAFALVLTPTRDFACELVDQFFALGHPFRLRVAAVVGGFDIRSQAKHLLTRPHLVIATPGRINVLLQNNPEIADMFAATKFLVLDQADQLLDNFNEDLKSIFQYLPKNRQNILFSANMTTNMQKLCDTYQEKPYAFQAYEGRV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0791 226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 217 IPR027417 -
Tpr3g0791 226 SMART ultradead3 34 222 IPR014001 -
Tpr3g0791 226 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 15 43 IPR014014 GO:0003724
Tpr3g0791 226 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 13 218 - -
Tpr3g0791 226 PANTHER RNA HELICASE 13 218 - -
Tpr3g0791 226 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 46 219 IPR014001 -
Tpr3g0791 226 Gene3D - 1 220 IPR027417 -
Tpr3g0791 226 Pfam DEAD/DEAH box helicase 40 208 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0791 Tpr-Chr3 7507871 7509064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0791 8 216 Eukaryotic Initiation Factors Gene Family AT3G19760 26.667 4.66e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0791 K14778 - gmx:100798597 263.848