Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0786 ATGAAAAGCCTCTGTCTTCAACCGTTGCTTGTTCCCAGCAGTGCCTTGGTTGATAGGAGAGTCTTCTTTGCAAACCATTTAACCACAAAGTGCTTTCCTAAGCAACTTCATTTCAACTCTCGCTGTGTTGTTGTCTCTTCATACTCGTCGAGTTCTGCAACTCTATCTGCCGAATCAGAAGTAGAAAAGAAGCAAGTATTTGATGGAGACAAGGCTGCTTTGCTTGTCAGAGAGCTCAGAAATAATTTTGATAGCGGCAAGACTAAGAGCTATGAATGGCGGATTTCACAATTAGAGGCCATAGCTAAGATGTTAGAAGAGAAAGAGAATGAAATTATTGATGCTCTTCATAAGGATGTTTCTAAACCAAGACTAGAAGCATATATAACTGAGGTTTTTCAGGCGAAATCTTCATGTAATGAAGCACTTCAAGAACTGAAACATTGGATGAAGCCTGAAAAGGTGAGTACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTATCAGAACCACTAGGAGTTGTGTTGATCATATCAACATGGAACTTTCCTTTCTCATTATCATTGGATCCAGTCATTGGAGCCATTTCAGCAGGTAACACAGTGGTTTTGAAACCATCAGAAATTGCTCCTGCAACATCATCTCTGCTTGCAAATTTGCTAGAAATTTATCTAGACAACTCTGCAGTAAGAGTTGTTGAAGGGTCCGTTCCTGAAACAACTGCACTCCTGGACCAGAAGTGGGATAAGATACTTTACACAGGTAGTGCTCGAGTAGGTCGCATTGTTATGGCTGCTGCTGCAAAGCATCTTACTCCAGTAATTCTGGAGCTTGGAGGAAAGTGTCCAGCAGTTGTTGATTCAAATATCAACTTACAAGTCACTGCTAGAAGGATAATTGCTGGCAAATGGGCATGTAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAAAGACTTTGCTCCAACACTTATAGCTGCTTTAAAAGAAGAGTTGGAGAATTTTTTTGGGAAAGATCCGATAGAATCGAAAGATATGTCTCGTATTGTGTCTCCAACTCAATTCGCACGACTCGTGAAACTCTTGGATGAGGATAAGGCATCTGACAAAATTGTTTTAGGAGGTCAGAGGGATGAGAAGAAATTAAAGATTGCTCCAACTATCTTATTGGATGTTCCAGAAGAAGCTCTGGTTATGCAAGAGGAGATATTTGGGCCAATATTGCCAATTATCACTGTAGACAACATAGAAGATAGCTATGGTATAATAAAATCAAGGCCAAAACCTCTGGCTGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTACGTGGATAAGATATCTTCTGGAGGGATGCTCATCAACGACGCTGTCGTGCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTGTTACCATGGAAAGTTTTCTTTTGATAGTTTCAGCCATAAGAAGGCAGTTTTGTATAAAGGTTTTGATTCAGATCCAGACATAAGGTATCCACCATATACACCTGAGAAGGCAAAAATGTTGAGGGCAATTTTAGACGGAAATATTTTTGCAATAATTCTTGCTTTGCTTGGATGGTCTAAGTAA 1638 0.3999 MKSLCLQPLLVPSSALVDRRVFFANHLTTKCFPKQLHFNSRCVVVSSYSSSSATLSAESEVEKKQVFDGDKAALLVRELRNNFDSGKTKSYEWRISQLEAIAKMLEEKENEIIDALHKDVSKPRLEAYITEVFQAKSSCNEALQELKHWMKPEKVSTSITTFPSSAEIVSEPLGVVLIISTWNFPFSLSLDPVIGAISAGNTVVLKPSEIAPATSSLLANLLEIYLDNSAVRVVEGSVPETTALLDQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSNINLQVTARRIIAGKWACNSGQACISVDYIITRKDFAPTLIAALKEELENFFGKDPIESKDMSRIVSPTQFARLVKLLDEDKASDKIVLGGQRDEKKLKIAPTILLDVPEEALVMQEEIFGPILPIITVDNIEDSYGIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVVHVATRGLPFGGVEESGMGCYHGKFSFDSFSHKKAVLYKGFDSDPDIRYPPYTPEKAKMLRAILDGNIFAIILALLGWSK* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0786 545 SUPERFAMILY ALDH-like 75 517 IPR016161 GO:0016491
Tpr3g0786 545 PIRSF ALDH 52 540 IPR012394 GO:0006081
Tpr3g0786 545 Coils Coil 95 118 - -
Tpr3g0786 545 PANTHER ALDEHYDE DEHYDROGENASE 43 545 IPR012394 GO:0006081
Tpr3g0786 545 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 80 499 IPR016162 GO:0016491
Tpr3g0786 545 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 281 481 IPR016163 GO:0016620
Tpr3g0786 545 Pfam Aldehyde dehydrogenase family 73 501 IPR015590 GO:0016491
Tpr3g0786 545 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 43 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0786 Tpr-Chr3 7479942 7484082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0786 1 545 Aldehyde Dehydrogenase Gene Family AT4G34240 62.569 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0786 K00128 - gmx:100800699 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0786 3 7479942 7484082 Tpr3g0786 3 7479942 7484082 ECH