Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0785 ATGGGCAAGGAAAATGAGTCACCTGTGAAGAAACAAGTTAGTGAGGATGGTTCATCGAGTGTTGAGATCGGGGATTTAGAATCTCAATCTCGACTTAGTTTGGAGAGGGAGATGGGCTTGGCGAGTTGTCGTGTGTGCCAGTGTGCTGAGTCTGATAAACGGGGTGATGCTGCTCTAGAATTTTTGGGTATCACCCCGGTTATAGAAAGCAAGGGGGATGAAAAGTCTGATGTTGACAAGGGAATTCCAAAAGATGTGACTGTTAACCGAAACCGTGAAAGCAAACCTGGGATGATGGAATTTGTAGGCCCTAATGGGGAGGTTTTCGTTTGTAAGAATGATTTGGAAATTGGTTTGTCTCATGAAGATACGTTAATTGAACTTGGTTGTTGTTGTAAAAATGACCTTGCTTTAGTACATTATGCTTGTGCACTCAAGTGGTTTATCAACCATGGATCTACCGTTTGTGAAATATGCGGACATATAGCAAATAATATTAGAATATCTGACTTCAATAAGGTTATTGGTTCTTTAAAAGAGTACGAATCATTGAGGGAAAGAACTGTCAATGGAGTTCCTGGTCCTGCACAAGATCATACAAATACTGGCGTGGATCCTGATGCTGTGGCTGCTATCCGGAGGCAACGGTTAAGTGAAATTGCACTCTGGTTTTGTCCTCATAATAGCAATAACTTTAACAACAGTAGCAACATGGACTCAGTTTCACAGCTTGTTTCTGAGCAGCCTTTGAATATTGTTGTCGAAGAAGCTGGCCCCGTACAGAGTCCTGCAACTAAGTGGGCCGTAGAGTGTACAGGGATCCTGCTTGCTACAGGGCTGCTTACCATCACCCTAGCATGGCTTATAGCTCCTCGTGTTGGGAAGAATATTGCAAGAAGTGGTCTTCATATCCTACTTGGAGGTGTTTGTGCTTTAACAGTGGTGATTTTTTTCCGCTTCTTTGTGCTTACCAGAATCAAGTATGGACCTGCACGTTATTGGGCAATATTGTTTGTTTTCTGGTTTCTTGTCTTTGGAATATGGGCTTCTCGGACGCACAGTGCTCATACAACGTGA 1077 0.4299 MGKENESPVKKQVSEDGSSSVEIGDLESQSRLSLEREMGLASCRVCQCAESDKRGDAALEFLGITPVIESKGDEKSDVDKGIPKDVTVNRNRESKPGMMEFVGPNGEVFVCKNDLEIGLSHEDTLIELGCCCKNDLALVHYACALKWFINHGSTVCEICGHIANNIRISDFNKVIGSLKEYESLRERTVNGVPGPAQDHTNTGVDPDAVAAIRRQRLSEIALWFCPHNSNNFNNSSNMDSVSQLVSEQPLNIVVEEAGPVQSPATKWAVECTGILLATGLLTITLAWLIAPRVGKNIARSGLHILLGGVCALTVVIFFRFFVLTRIKYGPARYWAILFVFWFLVFGIWASRTHSAHTT* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0785 358 MobiDBLite consensus disorder prediction 12 27 - -
Tpr3g0785 358 ProSiteProfiles Zinc finger RING-CH-type profile. 103 166 IPR011016 GO:0008270
Tpr3g0785 358 MobiDBLite consensus disorder prediction 1 30 - -
Tpr3g0785 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 162 IPR013083 -
Tpr3g0785 358 PANTHER ZINC FINGER, RING-CH-TYPE 12 357 - -
Tpr3g0785 358 SUPERFAMILY RING/U-box 120 162 - -
Tpr3g0785 358 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 12 357 - -
Tpr3g0785 358 Pfam RING-variant domain 123 159 IPR011016 GO:0008270
Tpr3g0785 358 SMART ringv_2 110 160 IPR011016 GO:0008270
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0785 1 348 C3H Transcription Factor Family AT5G08750 61.983 2.02e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0785 - - gmx:100805323 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0785 3 7475425 7478935 Tpr3g0785 3 7475425 7478935 ECH