Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0772 ATGAAGGTGAAGAAGGGTTGGCTAGCGGTTCAAGTTGGTTCAGAGGAAGAACTATCTCAAGAGGGTGGTGTAGATGATTCACAAAGATTTGTGATTCCTATTTCTTATCTTTATCATCCTCTTTTCAAGCGACTTCTTGACAAAGCTTATGAGATTTATGGCTACAACACTGATGGTCCTCTTAAGCTACCATGTTCTGTTGATGACTTTGTTCACCTCAGATGGCGAATTGAAAAAGAATCTACACCTTATCACCACCACCATCATCATCATCATCACAACAACCATCATCATATTCTCCCTCATGCTTTGTCTTTCAATTCTTGTTAG 330 0.3939 MKVKKGWLAVQVGSEEELSQEGGVDDSQRFVIPISYLYHPLFKRLLDKAYEIYGYNTDGPLKLPCSVDDFVHLRWRIEKESTPYHHHHHHHHHNNHHHILPHALSFNSC* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0772 109 PANTHER SMALL AUXIN-UP RNA-RELATED 1 94 - -
Tpr3g0772 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 94 IPR003676 GO:0009733
Tpr3g0772 109 Pfam Auxin responsive protein 3 76 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0772 Tpr-Chr3 7376275 7376921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0772 3 78 Calmodulin-binding Proteins AT3G43120 44.737 2.51e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0772 K14488 - mtr:MTR_3g097120 153.68