Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0771 ATGTTGCCCCCAAATTCTAGGAGGTCTCCTCTGAAAATATTGATGAGGTGGTTCATATTCCTTGTTGTCTTGAAACTCAGTTTTGCAATCAAAGATCCTGACATAGAAGGTGAAGCTCTGCTTGATCTTTTGAATTACCTCAATGATTCCAATAATCAAATAAATGATTGGGATAGTCATTTAGTGAGCCCTTGTTTCAGTTGGTCACATGTAACTTGTAAAAATGGACATGTCATATCTCTGACCCTAGCTTCCATTGGATTTACTGGAACACTTTCACCCTCAATTACCAGATTGAAATATTTGGTTAACTTGGAATTGCAGAACAACAATATTTCCGGCCCTTTACCTGATTACATTGCCAACTTGACATACCTACAATATCTAAATCTGGCTAATAATAATTTTAATGGTTCTGTACCACTTATATGGAGTCAACTATCCAGTCTCAAGAATGTGGATCTGTCATCTAATGGTCTTACTGGAACTATCCCAACACAACTCTTTTCAGTTCCAATGTTTAACTTTTCAGATACGCACCTTGGTTGCGGCTCTAGCTTCAAGCAGCCTTGTAGTTCTAAATCTGATCATCCAGTTTCAACCAAAAAATCGAAAGTGGCAAAAGCCGTGCGTTATGCGAGTTATGGTGCATTTGCACTTTTGATTCTTGGGGCCATCTTTACATATAGACACTATCAAAAGCAAAGATACAAAAGTGATGTCTTTGTTGATGTTTTAGGTGAAGATGAGACCAAAATTTCTTTTGGCCAACTAAGAAAGTTTTCTTTGCGCGAACTCCAACTTGCAACTAAAAATTTCAGTGAAAGCAATGTAATTGGCCAAGGTGGTTTTGGAAAAGTGTATAGAGGACTGCTCTCAGATAACACAAAAGTTGCTGTGAAACGCCTCACCGATTATCATAATCCTGGTGGCGAGGCTGCGTTCGAGAGAGAAGTTCATCTCATTAGTGTCGCGGTTCATAGAAACCTCCTAAGACTAATTGGGTTCTGTACAACCTCAACTGAAAGAATCCTTGTATATCCTTTCATGGAAAATCTAAGTGTAGCATATCGATTAAGAGATTTGAAATCCGATGACAAAGGCTTGGATTGGCCAACAAGGAAGCGTGTGGCTTTCGGTACAGCGCATGGTTTGGAATATCTACACGAGCAATGCAATCCGAAGATAATTCACCGTGATCTAAAGGCTGCAAATATCCTTTTAGATGACGAGTTTGAACCTGTTTTAGGTGATTTTGGACTAGCCAAGCTAGTCGATGTAAGGATGAGTCATGTTACCACTCAAGTGCGAGGTACAATGGGTCACATTGCCCCGGAATATTTGTCAACTGGAAAATCATCAGAGAAGACAGATGTTTTTGGATATGGCATAACACTTCTAGAACTTATCACCGGTCAACGCGCAATTGACCTCTCTCGGCTTGAAGAGGAGGAAGATGTTCTTCTCATTGATCATGTAAAAAATCTACTAAGAGAAAATAGAGTGGAGGACATAGTGGACAGCAATTTGGAGACTTTTGATCCTAAAGAAGTTGAAACCATTCTTCAAGTTGCATTACTTTGCACACAAGCCTATCCAGAGGATCGTCCGACAATGTCAGAAGTGGTAAAAATGTTGCTAGGAGTCGGATTAGCAGATAGATGGGCCGACTGGAAGCAACTTGAAGAAACTAGAAATGAAGAAATAGAATTATCACTCATGACTCACCAATTTCCTTGGAGTGATGAATCTACTCTTGATCAAGAAGCTATACAACTTTCAAGAGCAAGATAG 1794 0.3958 MLPPNSRRSPLKILMRWFIFLVVLKLSFAIKDPDIEGEALLDLLNYLNDSNNQINDWDSHLVSPCFSWSHVTCKNGHVISLTLASIGFTGTLSPSITRLKYLVNLELQNNNISGPLPDYIANLTYLQYLNLANNNFNGSVPLIWSQLSSLKNVDLSSNGLTGTIPTQLFSVPMFNFSDTHLGCGSSFKQPCSSKSDHPVSTKKSKVAKAVRYASYGAFALLILGAIFTYRHYQKQRYKSDVFVDVLGEDETKISFGQLRKFSLRELQLATKNFSESNVIGQGGFGKVYRGLLSDNTKVAVKRLTDYHNPGGEAAFEREVHLISVAVHRNLLRLIGFCTTSTERILVYPFMENLSVAYRLRDLKSDDKGLDWPTRKRVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEPVLGDFGLAKLVDVRMSHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELITGQRAIDLSRLEEEEDVLLIDHVKNLLRENRVEDIVDSNLETFDPKEVETILQVALLCTQAYPEDRPTMSEVVKMLLGVGLADRWADWKQLEETRNEEIELSLMTHQFPWSDESTLDQEAIQLSRAR* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0771 597 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Tpr3g0771 597 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Tpr3g0771 597 ProSiteProfiles Protein kinase domain profile. 273 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0771 597 SUPERFAMILY L domain-like 37 172 - -
Tpr3g0771 597 Pfam Protein kinase domain 274 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0771 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Tpr3g0771 597 PANTHER LRR RECEPTOR-LIKE KINASE 13 597 - -
Tpr3g0771 597 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 597 - -
Tpr3g0771 597 SMART serkin_6 273 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0771 597 Gene3D Ribonuclease Inhibitor 34 209 IPR032675 -
Tpr3g0771 597 Gene3D Transferase(Phosphotransferase) domain 1 350 565 - -
Tpr3g0771 597 SUPERFAMILY Protein kinase-like (PK-like) 252 546 IPR011009 -
Tpr3g0771 597 Gene3D Phosphorylase Kinase; domain 1 242 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0771 Tpr-Chr3 7359573 7366787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0771 33 592 Receptor kinase-like Gene Family AT5G65240 56.463 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Tpr3g0771 Pkinase 6.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0771 - - gmx:100800886 992.26