Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0770 ATGGCCGCTAATAACACTTTGCCTGCAGCATATGCAACAAGTGCAGCAGTACCAGATTGGTTAAACAAAGGAGACAACGCATGGCAAATGATAGCAGCAACCCTTGTCGGAATCCAAAGCATGCCGGGACTAGTTATCCTCTACGGCAGCATAGTGAAAAAAAAATGGGCTGTAAACTCTGCTTTCATGGCTCTCTATGCTTTCGCAGCGGTTATAATTTGTTGGGTTACATGGGCTTATAAGATGTCATTTGGTGAAAAACTTTTACCCTTTTGGGGTAAAGCCGGGCCAGCGTTAGGCCAGAAATTTCTAATTAAACAGGCCGCGCTACCTAGCACGGCCCATTATTATAATAATGGGGATTTGGAAACTGCTGAGCTTGATCCATTTTATCCAATGGCTACTATGGTTTGGTTTCAGTGTGTTTTTGCTGCAATTGCATTAGTTATATTGGCTGGTTCTGTTTTGGCTAGGATGAGTTTTAAGGCATGGATGATGTTTGTGCCACTTTGGTTAACTTTTTCTTATACTGTTGGTGCTTTTAGTGTGTGGGGTGGTGGATTCTTGTTTCAATGGGGTGTTATGGATTATTCTGGTGGTTATGTTATTCATCTTTCTTCTGGTATTGCTGGTTTTACTGCTGCTTATTGGGTTGGGCCTAGATCAAAGAAGGACAGAGAAAGATTCCCACCAAACAATGTATTACTAACATTGGCAGGGGCAGGGTTACTATGGTTAGGATGGGCAGGTTTCAACGGTGGAGATCCTTATTCAGCCAACACTGATTCCTCCATGGCTGTTCTCAACACAAACATTTGTGCTGCCACAAGTCTCTTAGTATGGACATGGCTTGATGTCATATTCTTTAAGAAACCATCTGTTATTGGAGCTGTTCAGGGCATGATCACCGGCCTTGTTTGCATCACTCCCGGCGCCGGTCTGGTTCAAGGATGGGCTGCCATAATAATGGGCATACTATCAGGAAGTATACCATGGTACACAATGATGGTACTTGGAAAAAAGTTTGCAATATTTCAAAAGGTTGACGACACCCTCGCCGTGTTCCACACTCACGCCGTGGCTGGCCTTCTAGGCGGTGTACTAACCGGCCTATTCGCCGAACCAACCCTAAGTACTCTCTTTCTCCCCGTCACCAATTCCAGAGGAGGTGTCTATGGAGGCTCCGGCGGAGTCCAAATCCTTAAACAAATAGTTGGTGCTTTATTCATCATTGGATGGAACATTGTTGCCACTTCAATTATTTGTTTAGTTGTAGGTTTAATTGTTCCTTTGAGAATGACTGAGGAAGAGTTACTTATTGGAGATGATGCAATTCATGGGGAAGAAGCTTATGCTTTGTGGGGTGATGGTGAGAAACTAAGCCTCTACAAAGATGATACTACAAGTCATGGAGTTTTGGCATCAAGTGGTGCCACTCAAATTGTCTAG 1449 0.4382 MAANNTLPAAYATSAAVPDWLNKGDNAWQMIAATLVGIQSMPGLVILYGSIVKKKWAVNSAFMALYAFAAVIICWVTWAYKMSFGEKLLPFWGKAGPALGQKFLIKQAALPSTAHYYNNGDLETAELDPFYPMATMVWFQCVFAAIALVILAGSVLARMSFKAWMMFVPLWLTFSYTVGAFSVWGGGFLFQWGVMDYSGGYVIHLSSGIAGFTAAYWVGPRSKKDRERFPPNNVLLTLAGAGLLWLGWAGFNGGDPYSANTDSSMAVLNTNICAATSLLVWTWLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIIMGILSGSIPWYTMMVLGKKFAIFQKVDDTLAVFHTHAVAGLLGGVLTGLFAEPTLSTLFLPVTNSRGGVYGGSGGVQILKQIVGALFIIGWNIVATSIICLVVGLIVPLRMTEEELLIGDDAIHGEEAYALWGDGEKLSLYKDDTTSHGVLASSGATQIV* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0770 482 Pfam Ammonium Transporter Family 27 451 IPR024041 GO:0008519|GO:0016020|GO:0072488
Tpr3g0770 482 PANTHER AMMONIUM TRANSPORTER MEP2 2 465 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tpr3g0770 482 Gene3D Ammonium transporter AmtB like domains 2 454 IPR029020 -
Tpr3g0770 482 ProSitePatterns Ammonium transporters signature. 196 221 IPR018047 GO:0008519|GO:0016020|GO:0072488
Tpr3g0770 482 TIGRFAM amt: ammonium transporter 25 451 IPR001905 GO:0008519|GO:0016020|GO:0072488
Tpr3g0770 482 PANTHER AMMONIUM TRANSPORTER 2 465 - -
Tpr3g0770 482 SUPERFAMILY Ammonium transporter 20 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0770 Tpr-Chr3 7352636 7357198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0770 133 470 Inorganic Solute Cotransporters AT2G38290 71.302 7.94e-170 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0770 K03320 - gmx:100785993 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0770 3 7352636 7357198 Tpr3g0770 3 7352636 7357198 ECH