Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0760 ATGGCATCCGCAATTGTTCGTAGGAACATCACCAACAACTTGAAAAGGTTGCCGTTATTGTCTTCTTCTTGTTGGGGTTTCAACAACCATAATAATAATCATTTGTTGAATGTTGTTGAAGAACAACATGGTGGTGGTAGTGGTAGCGTTTCCTTTCACGCAGAAGCTGGTGGTGTTGGATTGCCATCTTACATGCGTGGAGCTGTTTATTGGGAACCCAACAAACCTCTCACCATTGAAGAATTTCACATTCCTCGCCCCAAAGCTGGTGAACTTCTCATCAAAACCAAAGGATGTGGAGTATGCCACTCTGATCTTCATGTCATGAAAGGTGAAATTCCGTTTTCCAGTCCTTGTGTTGTGGGGCATGAGATTACTGGTGAAGTTGTTGAACATGGACAACACACCGATGCCAAAACCATAGAAAGGCTTCCGATTGGATCTCGAGTTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGTAACTATTGTTCAAAGGGCCATGATGATCTATGCGAAGCCTTTTTTGCTTATAATCGAGCACATGGAACCCTCTATGATGGTGAAACTCGACTATTTCTTCGAAGCAGTGGAAAACCGGTATTCATGTATAGTATGGGAGGGCTTGCTGAATACTGCGTTGTGCCGGCAAATGCATTGGCTGTATTACCAAGCTCAATGCCATATACCGAGTCTGCAATTTTAGGATGTGCTGTTTTTACTGCTTATGGTGCTATGGCTCATGCAGCTGAAGTTCGCCCGGGCGATACTGTTGCTGTTATTGGAACTGGGGGTGTTGGTTCTAGTTGTTTGCAGATAGCTAGAGCATTTGGTGCCTCAGATATAATTGCTGTCGATATTCAGGATGATAAGCTAGAGAAAGCAAAGACACTTGGTGCAACTCACACAATAAATTCGGCAAAGGAAGATCCCGTTGAAAAGATACTTGAAATTACTGGTGGAAAGGGTGTTGACGTTGCTGTGGAAGCCTTGGGGAGACCACAGACATTTGCTCAGTGCACACAAAGTGTGAAGGATGGAGGAAGAGCCGTGATGATTGGACTAGCAAAAGCTGGTTCTTTAGGAGAGGTGGATATAAATAGACTTGTTCGCAGAAAGATAAAAGTTATTGGTTCATATGGAGGCAGGGCTAGGCAAGATCTTCCAAAGTTAATTAGATTGGCAGAAACAGGTATCTTTGACCTTGGCCATGCTGTTTCAAGAAAATACACTTTTGAGGAGTCTGGCAAAGCATTCCAGGATCTCAACGAAGGAAATATCATTGGTCGAGCTGTAATTGAGATAGTATAG 1311 0.4363 MASAIVRRNITNNLKRLPLLSSSCWGFNNHNNNHLLNVVEEQHGGGSGSVSFHAEAGGVGLPSYMRGAVYWEPNKPLTIEEFHIPRPKAGELLIKTKGCGVCHSDLHVMKGEIPFSSPCVVGHEITGEVVEHGQHTDAKTIERLPIGSRVVGAFIMPCGNCNYCSKGHDDLCEAFFAYNRAHGTLYDGETRLFLRSSGKPVFMYSMGGLAEYCVVPANALAVLPSSMPYTESAILGCAVFTAYGAMAHAAEVRPGDTVAVIGTGGVGSSCLQIARAFGASDIIAVDIQDDKLEKAKTLGATHTINSAKEDPVEKILEITGGKGVDVAVEALGRPQTFAQCTQSVKDGGRAVMIGLAKAGSLGEVDINRLVRRKIKVIGSYGGRARQDLPKLIRLAETGIFDLGHAVSRKYTFEESGKAFQDLNEGNIIGRAVIEIV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0760 436 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 227 400 IPR036291 -
Tpr3g0760 436 Gene3D - 242 379 - -
Tpr3g0760 436 SMART PKS_ER_names_mod 72 433 IPR020843 GO:0016491
Tpr3g0760 436 Pfam Alcohol dehydrogenase GroES-like domain 90 220 IPR013154 -
Tpr3g0760 436 CDD Zn_ADH10 65 434 - -
Tpr3g0760 436 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 65 435 - -
Tpr3g0760 436 SUPERFAMILY GroES-like 60 268 IPR011032 -
Tpr3g0760 436 Pfam Zinc-binding dehydrogenase 265 396 IPR013149 -
Tpr3g0760 436 Gene3D - 69 425 - -
Tpr3g0760 436 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 65 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0760 Tpr-Chr3 7260148 7264021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0760 79 354 Monolignol Biosynthesis Gene Families AT4G37970 27.046 6.65e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0760 - - aprc:113855348 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0760 3 7260148 7264021 Tpr3g0760 3 7260148 7264021 ECH