Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0753 ATGGGTAGATCCCCTTGCTGTGAAAAACAACACACCAACAAAGGTGCTTGGTCTAAAGAAGAAGACGACCGTCTCATCAAATACATCAAAGATAACGGCGAAGGTTGTTGGCGTTCTCTTCCCAAAGCTGCTGGCTTGGCTCGTTGTGGCAAAAGTTGCAGACTCAGATGGATAAATTATCTCAGACCTGATCTCAAGAGAGGAAACTTCACTCCTGATGAAGATGAACTTATCATTAACCTACACACTTCTGTTGGTAACAAGTGGTCTCTAATTGCTCAGAAATTGCCGGGAAGAACTGACAATGAAATCAAGAATTACTGGAACACACATATCAAGCGCAAACTCCAGAGCTGTGGAATCGATCCTTCAACTCATCGTCCATTTAAGCGTATGACTGACACCGTTGCTGGCGCCAGTACTTCCTCAACAACCACTGCCTCCCCAGCTGCTACTGCTACTCCGTTGCCTTCGGTCCCCGCAGGCAACGAGAATAGTAGTAGTAGCAGCATAAGCCGCAACAAAATCAAGAGCGAGTTTCCGTTATTCAGTACTACTACCAGTCCCTCTTTAAAACAAAAGTTTGTTGTAACTGATTCTGGTAATGGTGGTGGTGTTGAAGATTCAGTTTCAAATACTAGCAGTGGAGTTACCATTGAAGAAATAGCTTATCCACCTCCTCCTCCCCAAATCAACTTGGAACTTTCATTGGCTCCACCTTCTTCTTCTCAACAGCTACAAAATGGGTGTATTTGTCGTCAAACTTTAGGGTTACAAAATAGTGGTAACCATCCTTGTAGATGCAACAATACTATCCCTATTGTTGGAGTTTCTAATGTTGCTTCATCATCTGCTGCTACCGCCGGCGCCGGTTATTGTTATTTTAAATATTTCGGAGCCGGGATTCTCAAATTTTGA 918 0.4357 MGRSPCCEKQHTNKGAWSKEEDDRLIKYIKDNGEGCWRSLPKAAGLARCGKSCRLRWINYLRPDLKRGNFTPDEDELIINLHTSVGNKWSLIAQKLPGRTDNEIKNYWNTHIKRKLQSCGIDPSTHRPFKRMTDTVAGASTSSTTTASPAATATPLPSVPAGNENSSSSSISRNKIKSEFPLFSTTTSPSLKQKFVVTDSGNGGGVEDSVSNTSSGVTIEEIAYPPPPPQINLELSLAPPSSSQQLQNGCICRQTLGLQNSGNHPCRCNNTIPIVGVSNVASSSAATAGAGYCYFKYFGAGILKF* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0753 305 CDD SANT 69 112 IPR001005 -
Tpr3g0753 305 PANTHER TRANSCRIPTION FACTOR MYB7 1 248 - -
Tpr3g0753 305 CDD SANT 16 61 IPR001005 -
Tpr3g0753 305 MobiDBLite consensus disorder prediction 136 172 - -
Tpr3g0753 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Tpr3g0753 305 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Tpr3g0753 305 Gene3D - 14 66 - -
Tpr3g0753 305 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Tpr3g0753 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Tpr3g0753 305 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Tpr3g0753 305 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Tpr3g0753 305 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 248 - -
Tpr3g0753 305 SMART sant 66 114 IPR001005 -
Tpr3g0753 305 SMART sant 13 63 IPR001005 -
Tpr3g0753 305 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Tpr3g0753 305 Gene3D - 68 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0753 Tpr-Chr3 7192687 7194320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0753 1 247 MYB Transcription Factor Family AT4G38620 51.417 5.69e-80 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tpr3g0753 Myb_DNA-binding 3.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0753 K09422 - rcu:8287593 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0753 3 7192687 7194320 Tpr3g0753 3 7192687 7194320 ECH
Tpr3g0753 3 7192687 7194320 Tpr3g3234 3 35616500 35618776 PCT