Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0749 ATGGAAAAAGATTGGAAGCCAAAGATTGGTATGGTTTTTTATAACATTGAAGAAGCTTGGAAGTTCTGGGTTGATTATGGTGGAAGACTTGGATTTGGAGTGAGGAAACAATATACACACAAGAAAAAAGATGGCTCAATCAGTTCTTGTAGGTTTGTTTGTTGCAAAGAAGGCTTACGGAAGCCAGACAAGCGAGATTATAAAACAATTAATCCAAGACCGGAGACTAGAACAAATTGTCGAGCAAGGATAGGACTTAAGCATACGGGTGGACAATTTATTGTGTATGATTTTGTAGAGGAACATAACCACAATGTACATCTACAAGAAACCATTCATATGTTGTCATATGAACAAAAAGTTTTAGAAGTTCAATGCCATCAAATTGATCTAGCAAATGATGACGGCCTACAACATAGGGCATCACTTGATTTAATGAGTAAAGAAGTGGAAGGTAGTAGTGACTCTGGATATACTCCCCCCGATCAAAAGCATAATATCCACAAAAGAAGGAAGATGAGTTTGGTAAATGGGGAAGTTGGGCATCTATTGCAATACTTTCAAAGACAATTGGTTGAAAATCCAACTTCATACCATGCCTATCAAATGGATGCTGAAGATCGAATCACCAATGTGTTTTGGGCAGATGCAAGGATGCTAATTGATTATGGGTATTTTGGTGATGTGGTTTCTCTTGATTCAACATACTGCACCGATTGTCCGCACATACCACTAGCAGTGTTTTCAGGATTTGACCATCATCGAGGAACGGTGATCTTTGGGGCTGCGTTATTATATGATGAAACAGCAGAGTCCTATAAGTGGCTCTTTGAGAAATTTCTAGAGGCACATAAGCAGAAAATGCCTCAAACATTTTTTACTGATCAAAACCAGACAATAGAAAAAGCATTAGCTGTTGTTATGCCTGGAACTTACAATGGCTTATGTACGTGGCACTTGATGCAGAACTTGGACAATTTAATGAAGGACAAGTCCGATTTTATTGTTGACTTTAAGAAGTGCATGTATGACTATGAAGATGAAGAACAGTTTGAAGAAGGTTGGAGAACCCTCCTTGTAAAGTATGATGTTAAGGAAAATACTTGGTTGCAAAGAGTGTACACTATAAAGGAGAAATGGGCAGCTTGTTATATGAAGAAAGCTTTTACATTAGGAATGCAAAGCACCCAACTTAGTGACAATGTGAATGTAGAAATTAAAAGTTTCATGAATGCAGACTTGGATATAATCAAGTTTTTCGAGCATTTTGAGGGTGTTGTAGAAGAAAAGCGATATAATGAACTGAAGTCTGAATGTGAAGCACGCCAAAATATTTCAAGACTCAAGTACCCTTATTCTGGTATCTTACAAAGCGTGTATGGGCTTTATACTCCCACTATTTTTGATCTATTTCAACACGAGTATGAGTTATTTGAAGCATGTTCCGTGAAGAGCATGAACAAAAATATGAACATGCAAACACCCACAATTGATTTTGTGATTGCCATGGTAAGGGATTTGGGAGAGTGGCAAGTGTCTTTTGATTTGGATAAGACTTCAATTAGTTGCTCTTGTCGTAAGTTTGAGAGCTTTGGTATACTTTGTTGTCATTGTATAAAGGTATTTATTCATATGGACGTCAAATCAGTGCCCGCACGTTATATCCTGAAAAGGTGGACAAAGTTAGCAAGAAGTGGGGCTTTACCTAATGTTGGTGTTAGTGACGTGGTAGAAGATGTAGATCTATCCCCATCGCAACGCTACAAAAAAATTTGTCCCCGCCTTATTAGGATAGCCATTGAAGCGTGTAGAAGTAAAGAAACATTCTTGTTCCTTAGCAAAGTTATTGATGAATTAGATAGGCAAATGTTGGAGTTTCAAAATAATCAAGTAAGTGTAACTCCAAGTCAGTTCCTTAGCAATATAAGAGATAGCATGTAG 1941 0.3751 MEKDWKPKIGMVFYNIEEAWKFWVDYGGRLGFGVRKQYTHKKKDGSISSCRFVCCKEGLRKPDKRDYKTINPRPETRTNCRARIGLKHTGGQFIVYDFVEEHNHNVHLQETIHMLSYEQKVLEVQCHQIDLANDDGLQHRASLDLMSKEVEGSSDSGYTPPDQKHNIHKRRKMSLVNGEVGHLLQYFQRQLVENPTSYHAYQMDAEDRITNVFWADARMLIDYGYFGDVVSLDSTYCTDCPHIPLAVFSGFDHHRGTVIFGAALLYDETAESYKWLFEKFLEAHKQKMPQTFFTDQNQTIEKALAVVMPGTYNGLCTWHLMQNLDNLMKDKSDFIVDFKKCMYDYEDEEQFEEGWRTLLVKYDVKENTWLQRVYTIKEKWAACYMKKAFTLGMQSTQLSDNVNVEIKSFMNADLDIIKFFEHFEGVVEEKRYNELKSECEARQNISRLKYPYSGILQSVYGLYTPTIFDLFQHEYELFEACSVKSMNKNMNMQTPTIDFVIAMVRDLGEWQVSFDLDKTSISCSCRKFESFGILCCHCIKVFIHMDVKSVPARYILKRWTKLARSGALPNVGVSDVVEDVDLSPSQRYKKICPRLIRIAIEACRSKETFLFLSKVIDELDRQMLEFQNNQVSVTPSQFLSNIRDSM* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0749 646 SMART 26again6 521 548 IPR006564 GO:0008270
Tpr3g0749 646 PANTHER OS03G0181600 PROTEIN 2 624 - -
Tpr3g0749 646 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 624 IPR031052 GO:0006355
Tpr3g0749 646 Pfam SWIM zinc finger 512 544 IPR007527 GO:0008270
Tpr3g0749 646 ProSiteProfiles Zinc finger SWIM-type profile. 510 546 IPR007527 GO:0008270
Tpr3g0749 646 Pfam MULE transposase domain 229 323 IPR018289 -
Tpr3g0749 646 Pfam FAR1 DNA-binding domain 21 106 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0749 Tpr-Chr3 7157157 7160130 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g0749 MULE 1.3e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0749 - - ccaj:109790316 806.979