Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0733 ATGTCTGCGGATGGTTTGTCGGGTTTCGATGTCGAAGTAAACATGAAAGACTTGACAGCAGAAGAAATACAAAATATGGAATTTGAATCTATAGAAAAAGCAGAGGAATTTTATGTAGAATATGCAAGGTGTCTTGGGTTTTCCGCTAGAAAAGATGTAAGGCGAGTCACCGCTGAAGGTGTTGTACATACACGTCAGATGGTTTGTTCTAGGCAGGGTGAGAGAGCTAAAAAAAATATTGAGCGCACTGAACGTTCGAGACAACCCAGGGGATTGTCACGAACATCTTGTGTAGCTATGATTCGATTTCACCTTAATAACAGTAGTGGTACTTATGGTGTTGTCTGCTTTATGCCCGTTCACAACCATCCTTTAACTCCATCCACACATGTTCACCTGATCCCCAAGTATCGTGGATTGAATGAAGCCGATAAGAATTTCGTAGATGGGTTGCATTCGTACGGGGTTAGATCTTGTCATATTCTGGGATATTTGATGGGTCAAAAAGGTGGTCATGCAGGGCTTGGTTTTTGCAAAAAAGACCTTTATAACTACATCACCAGGAGTGGGAAGGCAAAAATGGAGGATGTTGGCGACGCGTATTCTGCTTTGTGTGATATCCAGACAAGAACAGAAAATGACCACCTTTTTTATTGTAAGTTTACACTCGATGATATGGGGCATCTAAATAATTTGTTTTGGTGCGACGGAGCTAGTCGCGTTGACTACAGCTGTTTCGGGGAAGTGATTGCCTTCGATGCGACTTATAAGAAGAACAAATACGACAGGCCACTCGTTGTTTTTTGTGGTTACAATCACCACAAGGAAACTACAGTTTTTGCCTGTGCCTTAATTGTCAACGAAAAAACTGAGACATACAAGTGGTTGTTAGAGACATTCTTAGATGCGATGTATCAAAAGCATCCGCTTCGGGTGGTGACTGATGGAGACAATGCTATGAGAGAAGCAATTAAATGTGTATTTCCGAATGCAAGTCACCGCCTTTGTTCTTGGCATATCCACCAGAATGCACTTGAAAATGTGAAGAATAAAATTTTTTGCCAAGAGTTCTCTTCGTTGGTTTATTCTACTTGTAGCCCTGCGAGGTTTGAAAGTGAGTGGCAGAGGATTATAGATGAGCATGGTCTATCAGGGAATCCGTGGACTCGAAAGGTTTATGAGACAAGGAAAAGTTGGGCAGCTGCGTTTATGCGGTCGGATATGTTCTATGGAATGAGAACGACTTCAATGTGTGAAGGTCTAAATTCATTTATTAAAAATTTTGTGCAGAAAAGAAGCACTCTAGTTGAATTTGTAAGGGATTTTCATAGAGCTTTAGCAGAGTACAGAAACCAGGAAATGACGTCTGATTTTGTTTCAACTTACTATAAACCTGTGATGTTAACACATATGCCAGGTCTTGAGCAAAAAGTTTCTGAGATCTTCACCAGAGCCATGTTTATGAAGGTTAGAGAACAGATAACAAATTCAGCCTCGCTGGTTATTGGTGAACAAGTTTCGTTGGGGAATACAGTGGTGATTAAAATGGATAGATTTGGCGTTCCCGGTTCAACGGTGACAGTTTGCGTTGATTTGGTTGGTCCCATTTTTAAATGTGAATGCCAACACTTTGAGCGCAGTGGGATTCCATGTTGTCACGTCTTTTGTGCCATCAAGCAGAGACACATGGATTACCTCCCGGACAACCTGGTTTGCAAAAGGTGGACTAAAATGGCGAAAAATAATGTCTTGACGTGTACGGTGGATAAACAGGATGCTGATAAGTTGGAAATGTATCGTCGAAGTTCATTGACTGCTGCGTTCAATACATTGTTGGAGGTTTGTTGTAAAACTGATTCCAGTTATAAGCAGGGTATCAGTGCAATGTACGGTCTTATTAACAAGTTCAAGAAAGCTGATGCTGGGAACAGAGGAAAAAATACAAATGAAACCCCGATTCGCGACCCAAAGAAGTCGAACGCCAAAGGCGCTCCTCGCAAATACAATAAACACAAGAAGAAGAAGAAGAATACAAAGTGTGGCCATTGTCAGATGGTTGGCCACGACAAATCTGGTTGTCCGGTACTACATCCGGGCAGCGATTTAGAATTCGACGACACTGTGCAGACTGAAAATGAATCGATTGATATGGATGTATCAGATTCGCTTACTGAAGGCAGAAACGACCGCGTACCCGGTGACAGGAGTAATGGTGGTCAGCGAAGGAAGAAACAAACTACTACAAGTACAACCACTGAAGTACCAACACAGTCCTCATCATCCAGCTACAATGTAGGGCACGGATACCCGCACTTTCCATCACAGTTTAGAGTAAATCAAAGTGTGGGGTTGTTTCCAAACTTTCCACCATCGGCTAACTGTGCACCGCATGCGCCACCAATGAACAGTAATATGGCTAACTGTGCACCGCATGCGCCACCAACGAACAGTTATATGCCGGGTGGATCTCATAATGTTCCTTCTCGTTCATCGTTCTTGCAAACCTTGGGGGACGTGGAGCTGAAAGCAAAAATGAAGAAAGAACGACCGGAAAATTGA 2559 0.4256 MSADGLSGFDVEVNMKDLTAEEIQNMEFESIEKAEEFYVEYARCLGFSARKDVRRVTAEGVVHTRQMVCSRQGERAKKNIERTERSRQPRGLSRTSCVAMIRFHLNNSSGTYGVVCFMPVHNHPLTPSTHVHLIPKYRGLNEADKNFVDGLHSYGVRSCHILGYLMGQKGGHAGLGFCKKDLYNYITRSGKAKMEDVGDAYSALCDIQTRTENDHLFYCKFTLDDMGHLNNLFWCDGASRVDYSCFGEVIAFDATYKKNKYDRPLVVFCGYNHHKETTVFACALIVNEKTETYKWLLETFLDAMYQKHPLRVVTDGDNAMREAIKCVFPNASHRLCSWHIHQNALENVKNKIFCQEFSSLVYSTCSPARFESEWQRIIDEHGLSGNPWTRKVYETRKSWAAAFMRSDMFYGMRTTSMCEGLNSFIKNFVQKRSTLVEFVRDFHRALAEYRNQEMTSDFVSTYYKPVMLTHMPGLEQKVSEIFTRAMFMKVREQITNSASLVIGEQVSLGNTVVIKMDRFGVPGSTVTVCVDLVGPIFKCECQHFERSGIPCCHVFCAIKQRHMDYLPDNLVCKRWTKMAKNNVLTCTVDKQDADKLEMYRRSSLTAAFNTLLEVCCKTDSSYKQGISAMYGLINKFKKADAGNRGKNTNETPIRDPKKSNAKGAPRKYNKHKKKKKNTKCGHCQMVGHDKSGCPVLHPGSDLEFDDTVQTENESIDMDVSDSLTEGRNDRVPGDRSNGGQRRKKQTTTSTTTEVPTQSSSSSYNVGHGYPHFPSQFRVNQSVGLFPNFPPSANCAPHAPPMNSNMANCAPHAPPTNSYMPGGSHNVPSRSSFLQTLGDVELKAKMKKERPEN* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0733 852 ProSiteProfiles Zinc finger SWIM-type profile. 524 562 IPR007527 GO:0008270
Tpr3g0733 852 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 22 606 IPR031052 GO:0006355
Tpr3g0733 852 MobiDBLite consensus disorder prediction 642 662 - -
Tpr3g0733 852 Pfam FAR1 DNA-binding domain 36 126 IPR004330 -
Tpr3g0733 852 MobiDBLite consensus disorder prediction 663 681 - -
Tpr3g0733 852 Pfam MULE transposase domain 249 343 IPR018289 -
Tpr3g0733 852 MobiDBLite consensus disorder prediction 720 741 - -
Tpr3g0733 852 PANTHER OS02G0262500 PROTEIN 22 606 - -
Tpr3g0733 852 MobiDBLite consensus disorder prediction 72 91 - -
Tpr3g0733 852 MobiDBLite consensus disorder prediction 742 763 - -
Tpr3g0733 852 MobiDBLite consensus disorder prediction 642 681 - -
Tpr3g0733 852 MobiDBLite consensus disorder prediction 72 89 - -
Tpr3g0733 852 MobiDBLite consensus disorder prediction 713 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0733 Tpr-Chr3 7057541 7060272 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr3g0733 MULE 8e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0733 - - ccaj:109792835 628.246