Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0721 ATGTTTGTGATGAGAGATCTGGAAGATAGAGATAACATGACATCATCTGAAGTATCTATGAAGGGAAATTCTGTTAACGGAAAAGGTGAAACCAACGATGGTGGTGTTGCCGATGGTCAAAATGGTTCTTCATCTTCATCATCAGGAAGAGAAGCTGAAGCTGCACTTTACAGAGAACTATGGCATGCGTGTGCTGGACCTTTGGTAACAGTTCCAAAAGAAGGAGAACTTGTGTTCTATTTTCCTCAGGGACATATTGAACAGGTTGAGGCTTCAACAAATCAGGCGTCGGAACAACACATGCCGGTTTACGATCTCCGTCCTAAGATCCTTTGTCGGGTTATCAACGTTATGTTGAAGGCTGAGCCAGATACTGATGAGGTGTTTGCACAAGTGACTTTGGTTCCAGAGCCAAATCAAGATGAGAATGCGGTGGAGAAAGAACCTCCGCCTGCTCCTCCGCCGCGGTTTCACGTCCATTCGTTTTGTAAAACGTTGACCGCATCTGACACTAGTACTCATGGTGGTTTTTCTGTTCTTAGGCGTCACGCTGATGAGTGTCTACCTCCACTGGATATGTCAAAGCAACCACCTACACAGGAATTGGTGGCCAAAGATCTACATGGGAATGAGTGGCGTTTTAGGCACATCTTTCGTGGTCAACCACGTAGACATTTGCTGCAAAGTGGTTGGAGTGTTTTTGTCAGTTCTAAGAGGCTGGTTGCTGGGGATGCATTTATATTTCTAAGAGGTGAGAATGGGGAGCTTCGTGTTGGTGTCAGGCGTGCAATGAGACAGCAGGGAAATGTTCCGTCCTCGGTTATCTCTAGCCATAGTATGCATCTTGGTGTCCTTGCAACTGCTTGGCATGCTGTGTTGACCGGGACCATGTTCACTGTCTATTACAAGCCTCGGACCAGTCCAGCTGAATTTATTGTTCCGTACGATCAATACATGGAGTCTCTTAAGAATAATTATACCATAGGCATGCGGTTCAAAATGAGATTTGAAGGTGAAGAAGCACCTGAGCAAAGGTTTACGGGAACCATTGTTGGAATTGAAGACTCTGACTCCAAAAGATGGCCTAAATCTAAATGGAGATGTCTCAAGGTTAGATGGGATGAAACATCTAACATACCTCGTCCCGAAAGAGTTTCCCCTTGGAAAATTGAGCCTGCTCTTGCTCCTCCAGCTCTAAATCCCCTTCCAATGCCCAGGCCGAAAAGGCCCCGAGCTAATGTGGTTCCATCATCCCCAGATTCTTCTGTTCTAACCCGCGAAGCATCATCCAAAGTAAGCATGGACCCTTTGCCCTCCAATGGTTTTCCGAGGGTCTTGCAAGGTCAAGAATCATCGACCTTGAGAGGAAATTTGGCAGAAAGCAATGACCCTTATACTGCAGAGAAGTCAGTTGCATGGCCACCAGGAAATGATGAAGAAAAGATTGATGCTGTTTCTACTTCAAGAAGGTTTGGATCAGAGAACTGGATGTCAATGTCAAGGCAGGAAGCAACATATTCAGATCTTCTGTCAGGATTTGGTGGTGCCCGTGGAGATCACGCTTCCCAACAATTGTTTGTCGATCAAACCGGTCATGTGGCCAATCACAGTAGGAAAAGTATGTTTGACCGTGAAGGCAAGCATAATGTGCTAAGTCAATGGCCTGCAATGCCACCTGGTCTGTCACTCAATTTCTTGCACTCTAATACGAGAGGTTCTGCACAAGGCAGTGATAATTCAACCTACCAAGTTCCAGGGAATATGAGGTACAGTGCATTCGGTGATTATTCTGTGCTTCATGGACACAAAGTAGAAAACCCACATGGAAACTTTTTGATGCCACCACCACCTCCAACTCAATATGAGAGTCCTCGTTCAAGAGAACTGCCTCACAAACAAGTATCTGCAAATACAAGCGAGGCTGCAAAACCGAAAGACGGTGACTGTAAGCTTTTTGGTTTCTCACTTCTCAGTAGCCCCACAATGCCAGAGCCCTCTATATCGCAAAGAAATAATACAAGTGAGCCAGTTAGTCACATGCAAATTTCATCACAACATCATACATTTGAAGATGATCCAAAGTCTGAGCATTCAAAGAGTTCAAAACCAGCAGCTGATAATCCAGTTGTAGTCGACGATCAAGAGAAGCTGTTGCAAATTTCTCAGCCTCATGTTAAAGATGTTCAATTCAAATCACAAAATGGTTCTGCTAGAAGTTGCACAAAAGTTCACAAGAAAGGGATTGCACTTGGTAGATCAGTGGACCTTACAAAGTTTAGTGACTATGATGAATTGACCGCTGAATTGGATCAGCTGTTTGAATTTGGAGGTGAATTAATATCTCCACAAAAGGATTGGCTTGTTGTCTTTACCGATAATGAGGGTGACATGATGCTTGTTGGCGATGACCCATGGCAGGAGTTTTGTTCGATGGTCCGCAAAATTTACATCTACCCGAAGGAGGAGATTCAGAAAATGAGCCCCGGTACCTTGAGTTCAAAAAATGAAGAGAATCATTCAGCTACTGAAGGCGATGCACAAGAAACCAAGTCTCAGCTGAATCCATCAGCTTCAGATGCTTGA 2583 0.4456 MFVMRDLEDRDNMTSSEVSMKGNSVNGKGETNDGGVADGQNGSSSSSSGREAEAALYRELWHACAGPLVTVPKEGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEPPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPKSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASSKVSMDPLPSNGFPRVLQGQESSTLRGNLAESNDPYTAEKSVAWPPGNDEEKIDAVSTSRRFGSENWMSMSRQEATYSDLLSGFGGARGDHASQQLFVDQTGHVANHSRKSMFDREGKHNVLSQWPAMPPGLSLNFLHSNTRGSAQGSDNSTYQVPGNMRYSAFGDYSVLHGHKVENPHGNFLMPPPPPTQYESPRSRELPHKQVSANTSEAAKPKDGDCKLFGFSLLSSPTMPEPSISQRNNTSEPVSHMQISSQHHTFEDDPKSEHSKSSKPAADNPVVVDDQEKLLQISQPHVKDVQFKSQNGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFGGELISPQKDWLVVFTDNEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGTLSSKNEENHSATEGDAQETKSQLNPSASDA* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0721 860 MobiDBLite consensus disorder prediction 399 433 - -
Tpr3g0721 860 MobiDBLite consensus disorder prediction 619 645 - -
Tpr3g0721 860 Pfam Auxin response factor 288 370 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Tpr3g0721 860 Gene3D - 159 264 IPR015300 -
Tpr3g0721 860 PANTHER AUXIN RESPONSE FACTOR 2 40 845 - -
Tpr3g0721 860 MobiDBLite consensus disorder prediction 660 684 - -
Tpr3g0721 860 MobiDBLite consensus disorder prediction 16 50 - -
Tpr3g0721 860 Pfam AUX/IAA family 784 825 IPR033389 -
Tpr3g0721 860 MobiDBLite consensus disorder prediction 660 708 - -
Tpr3g0721 860 Gene3D - 325 395 - -
Tpr3g0721 860 ProSiteProfiles PB1 domain profile. 738 820 IPR000270 GO:0005515
Tpr3g0721 860 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 40 845 IPR044835 GO:0003677|GO:0006355|GO:0009725
Tpr3g0721 860 MobiDBLite consensus disorder prediction 685 701 - -
Tpr3g0721 860 SUPERFAMILY CAD & PB1 domains 738 815 - -
Tpr3g0721 860 ProSiteProfiles B3 DNA-binding domain profile. 162 264 IPR003340 GO:0003677
Tpr3g0721 860 SUPERFAMILY DNA-binding pseudobarrel domain 158 291 IPR015300 -
Tpr3g0721 860 MobiDBLite consensus disorder prediction 1 15 - -
Tpr3g0721 860 MobiDBLite consensus disorder prediction 827 860 - -
Tpr3g0721 860 MobiDBLite consensus disorder prediction 845 860 - -
Tpr3g0721 860 MobiDBLite consensus disorder prediction 1 50 - -
Tpr3g0721 860 MobiDBLite consensus disorder prediction 415 433 - -
Tpr3g0721 860 Pfam B3 DNA binding domain 162 263 IPR003340 GO:0003677
Tpr3g0721 860 Gene3D - 734 827 - -
Tpr3g0721 860 SMART B3_2 162 264 IPR003340 GO:0003677
Tpr3g0721 860 CDD B3_DNA 160 262 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0721 Tpr-Chr3 6922102 6927572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0721 13 860 B3 DNA Binding Superfamily AT5G62000 63.699 0.0 1080
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Tpr3g0721 B3 1.7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0721 - - gmx:100815956 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0721 3 6922102 6927572 Tpr3g0721 3 6922102 6927572 ECH