Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0715 ATGGCTTTCTTTGACCAATCACCACGCCACTCTCTTGTTCCTGGATTTCTTTACTCATCAAATGCACTCTCCCATTTGGATTCTTCATCAATCAACAACACCATTAATAATCATGCAGGGTTACCACCATCATCACATTCATCATCATCATCATTACCATCACGATCACATGAATGGACTAGGAAAAATATTCCTATGATCCCTTCACCAAATGAGAGTATTCCAATGTTTTCTCCCGCGTACTATGCTGCGTGCAGTGCTGGCGGTGTCTTCAGCTGTGGTCTTACTCACATGGCTGTCACTCCTCTTGATCTCGTCAAGTGCAACATGCAGATTGACCCTAAAAAGTATAAGAGCATCACTTCAGGATTTGGAGTTTTACTGAAGGAGCAGGGTGCTAAAGGTTTCTTCAAAGGGTGGGTGCCAACTTTGCTTGGTTACAGTGCTCAAGGAGCATGCAAGTTTGGATTCTATGAATTCTTCAAAAAGTATTACTCAGATCTTGCAGGACCAGAGAATGCAGTCAAGTACAAAACTTTCATATATCTAGCTGGTTCTGCTTCAGCTGAAGTTATTGCTGATGTTGCACTTTGTCCTATGGAGGCGGTAAAAGTTCGTGTTCAAACTCAGCCCGGCTATGCTCGTGGTTTGTCTGATGGGTTACCTAAGTTTATCAAGGCTGATGGTGTTTCCGGGTTGTATAAAGGACTTGTTCCTCTTTGGGGCCGTCAGATACCATACACAATGATGAAATTTGCTTCATTTGAGACTATTGTGGAGATGATCTACAAAAATGTCATTCCAACCCCCAAAGCACAATGCAGCAAAAGTAAGCAACTTGGAGTCAGTTTTGCAGCAGGATATATTGCAGGTGTACTGTGCGCAATTGTCTCACACCCTGCCGATAACCTTGTTTCTTTTCTCAACAATGCTAAGGGAGCCACTGTTGGTGATGCAGTGAAGAAGATCGGAGTAGTTGGTCTTTTCACTCGCGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTAACTGGAGCTCAGTGGGGTCTCTATGATTCATTTAAAGTATTTGTAGGACTGCCAACTTCTGGTGGAGCTGCTCCTGCACCTGTGAAATAG 1119 0.4343 MAFFDQSPRHSLVPGFLYSSNALSHLDSSSINNTINNHAGLPPSSHSSSSSLPSRSHEWTRKNIPMIPSPNESIPMFSPAYYAACSAGGVFSCGLTHMAVTPLDLVKCNMQIDPKKYKSITSGFGVLLKEQGAKGFFKGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAVKYKTFIYLAGSASAEVIADVALCPMEAVKVRVQTQPGYARGLSDGLPKFIKADGVSGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKNVIPTPKAQCSKSKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTSGGAAPAPVK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0715 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 80 164 IPR018108 -
Tpr3g0715 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 372 IPR044677 GO:0005315|GO:1990547
Tpr3g0715 372 Gene3D Mitochondrial carrier domain 81 357 IPR023395 -
Tpr3g0715 372 PANTHER PHOSPHATE CARRIER PROTEIN 1 372 - -
Tpr3g0715 372 Pfam Mitochondrial carrier protein 179 265 IPR018108 -
Tpr3g0715 372 Pfam Mitochondrial carrier protein 83 166 IPR018108 -
Tpr3g0715 372 SUPERFAMILY Mitochondrial carrier 81 352 IPR023395 -
Tpr3g0715 372 MobiDBLite consensus disorder prediction 41 63 - -
Tpr3g0715 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 177 261 IPR018108 -
Tpr3g0715 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 278 357 IPR018108 -
Tpr3g0715 372 MobiDBLite consensus disorder prediction 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0715 Tpr-Chr3 6883591 6886583 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0715 6 370 Chloroplast and Mitochondria Gene Families AT5G14040 74.457 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0715 K15102 - gmx:100800530 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0715 3 6883591 6886583 Tpr3g0715 3 6883591 6886583 ECH