Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0713 ATGGCAGCTTTTGAGTACCATTACCAACAACCTTTCTTTGTTGACTCTGCACCACCATACTTCACCATTAAGATGTCTTCTCAGCTTGATGACCAAGTCCATATTATAAACAGTAGTAGCTGTGTTGAACAAAACTCTAAGAATAGCATATGTGAGAATCTTAGTCCTGAATCATCTTCCATGGTTGTTGATAATCTTGAAAAGGGTGAACAAGTTACTCAGAAAGTGAGTTCTATGGAGAAGAAGAGAAGAGTTAGAAACAAGTCTTCTTTGAGTAGCCCCTTATCTAAGGATGCAAAAGAAGGGAGAGGCAAAAAACAAAAGAAGAGTAGTGGTGAGGGGATGAAAGGAGACGAGAAGAAAAAAGAAGAGAAGAAGAAGGATCAAAAGAAAAATGTTGAAGAACCTCCAACTGGCTATATCCATGTCAGAGCAAGAAGGGGTCAGGCAACAGATAGCCACAGCCTTGCTGAAAGGGTGAGAAGAGAGAAAATAAGTGAAAGGATGAAGATATTGCAGCAACTTGTCCCCGGCTGTGATAAGATAACTGGGAAGGCCCTTGTGTTGGATGAAATAATCAATTATGTACAGTCCCTACAGAATCAAGTAGAGTTCCTTTCAATGAAACTTGCTTCAGTGAATCCAATCTTCTTTGACTTTGCAATGGACCAAGATCATCAGAGATTAAATAGCATTACATCACCATCACCAACATCAGGACCACTACAATCTGTAGCAATATGCAGCTCCAACCATGCCACACCTTTTGCTGACACAAGTTTCCACACTGCTGATAATGATCACTATGTTTTGGATTATCCAACTCAAGTTTTTCTTCAAGGACAGAGGTCAAATACCTTCTTTGAGCACACTGATGGACCCTTTTGGGACGTAGAAGATCAACGACAAAAGCTTCTTAATCCATATGGATTCGGCAACAATACATGTTCCTTAAATTAA 960 0.3979 MAAFEYHYQQPFFVDSAPPYFTIKMSSQLDDQVHIINSSSCVEQNSKNSICENLSPESSSMVVDNLEKGEQVTQKVSSMEKKRRVRNKSSLSSPLSKDAKEGRGKKQKKSSGEGMKGDEKKKEEKKKDQKKNVEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDKITGKALVLDEIINYVQSLQNQVEFLSMKLASVNPIFFDFAMDQDHQRLNSITSPSPTSGPLQSVAICSSNHATPFADTSFHTADNDHYVLDYPTQVFLQGQRSNTFFEHTDGPFWDVEDQRQKLLNPYGFGNNTCSLN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0713 319 MobiDBLite consensus disorder prediction 98 157 - -
Tpr3g0713 319 CDD bHLH_AtBPE_like 139 223 - -
Tpr3g0713 319 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 319 IPR024097 GO:0006355
Tpr3g0713 319 Pfam Helix-loop-helix DNA-binding domain 153 200 IPR011598 GO:0046983
Tpr3g0713 319 MobiDBLite consensus disorder prediction 61 157 - -
Tpr3g0713 319 Gene3D - 146 215 IPR036638 GO:0046983
Tpr3g0713 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 199 IPR011598 GO:0046983
Tpr3g0713 319 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 1 319 - -
Tpr3g0713 319 SMART finulus 155 205 IPR011598 GO:0046983
Tpr3g0713 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 214 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0713 Tpr-Chr3 6852801 6856180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0713 1 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 45.385 2.32e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr3g0713 HLH 5.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0713 - - gmx:100796018 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0713 3 6852801 6856180 Tpr3g0713 3 6852801 6856180 ECH