Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0709 ATGGATGATGACCATCAATATGAAAATGGTAGGCATAAGGTGGAATTCTACAGAGGAGCACATTCCCCGTGGAATACGGATCCCCAGCATCAAATAAAGGAACAAAATGCCCTAGTTATGAATAAAAAAATTAGGTCCATTATGGCTGAAAGGCAGGCTGCCCTTCTGGAACTTGAACTAGAGGCTGCTATATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGCAGCCCTTCGGCAGAGGGATGAAGCACTTGCTCAGAGGGATAATGCTCTATTGGAACGGGATAATGCCCTTGCAGCCCTTCAAAGTCGGAGTGGTGCTTCCAACTTTCCATTCAATGGTGGAATTCAACGAGGATCAAAGCGGATGCACCATTCTTCAAACCATATATCCAACATTTCAGAACCAGCGTATAGCACGGCAGATATAATAATAAGAGACGCTTCCCCGGTTACTGTTATAACTTCTGAAGCTGTCAAATCTCATCTAACAAAGAGAACAAAGGAGAACAAGGCATCAAAGTCGCCAACCAAAATAAAGAAACTGGGTGAAGATTTAAATAGGAAGGCTTACTCTGAAGGAACAAAGATCAAATCCGAATGGGATAGACAAGATGTTGGCTTGAATTTGATTGCTTTCGATGAAACTGTCATGCCTGTCCCAGTTTGCTCGTGTACCGGAGTACCACGTCAGTGCTACAAATGGGGGAATGGTGGATGGCAATCATCTTGTTGTACCACTACATTATCAATGCATCCACTACCACAACTTCCCAACAAGCGCCATGCTCGCATTGGAGGGCGGAAAATGAGTGGCAGTGTTTTTATCAGACTTCTCAGTAGGTTTGCATCACAAGGCCATGATTTGTCTATTCCATTGGATCTTAAGGATTATTGGGCCAGACATGGAACAAATCGTTACATTACTATCAAGTAG 939 0.4356 MDDDHQYENGRHKVEFYRGAHSPWNTDPQHQIKEQNALVMNKKIRSIMAERQAALLELELEAAISEKNEALAARDAALRQRDEALAQRDNALLERDNALAALQSRSGASNFPFNGGIQRGSKRMHHSSNHISNISEPAYSTADIIIRDASPVTVITSEAVKSHLTKRTKENKASKSPTKIKKLGEDLNRKAYSEGTKIKSEWDRQDVGLNLIAFDETVMPVPVCSCTGVPRQCYKWGNGGWQSSCCTTTLSMHPLPQLPNKRHARIGGRKMSGSVFIRLLSRFASQGHDLSIPLDLKDYWARHGTNRYITIK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0709 312 Pfam GAGA binding protein-like family 1 312 IPR010409 -
Tpr3g0709 312 SMART GAGA_bind_2 1 312 IPR010409 -
Tpr3g0709 312 Coils Coil 53 94 - -
Tpr3g0709 312 PANTHER PROTEIN BASIC PENTACYSTEINE4 1 312 - -
Tpr3g0709 312 PANTHER - 1 312 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0709 Tpr-Chr3 6826575 6830610 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0709 1 312 BBR or BPC Transcription factor family AT2G21240 58.280 1.55e-126 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Tpr3g0709 GAGA_bind 9.9e-98 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0709 - - gmx:100785547 516.153