Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0708 ATGGGTTGCGCGCTCGGAAAACCTGCCGGTGCTGGAGACCGACACCGTCGCCGAGATAACACTGTTACTTCTGACGGAGGTAATAATGCTGTTAAGGTTGGGGAGAAGAAGGAGACTGAAGCTTCTAACGCCGGTGAACTTTCCGGCAATGTTCCGGCAACTGTGACCCGGCTACCTCGAATCAATTCATTGGCGGCAACTCAGCCGAGTTGGCCGCCGTGGTTGATGGAAGTCGCCGGTGATGCAATCCGAGACTGGGCTCCTCGCCGCGCCAACACTTTCGAGAAGCTTGCTAAGATTGGGAAAGGGACTTATAGCAATGTGTACAAAGCAAAAGACCTTATTACCGGAAAGATAGTGGCATTGAAGAAAGTTAGAATTGATAATATGGAAGCTGAGAGTATAAAGTTCATGGCAAGAGAGATTCTTGTTTTGAGGAAGCTAGATCACCCCAATGTAATAAAGCTTGAGGGTTTGGTTACTTCAAGAATATCATCAAGTCTTTACTTGGTATTTGAGTACATGGAACATGATCTTTCTGGTCTTATTGCTGGCATTGGTGTCAAATTCTCTGAGCCTCAGGTAAAATGTTACATGAAACAATTATTGTCTGGCCTTGAGCATTGCCACAGCCGAGGTGTATTGCACCGCGATATCAAGGGCTCCAATCTACTTATTGACGACAAAGGAATACTTAAAATTGCAGATTTTGGACTTGCAACTTTCTATGATTCTAAGCAAAAGCATGCGATGACTAGTAGAGTTGTGACCCTTTGGTATCGTCCTCCTGAGCTTCTTCTTGGGGCTACATTCTATGGTGTTGGGATTGATCTTTGGAGTGCTGGTTGCATCTTAGCAGAGCTTCTTGGTGGAAAGCCAATCATGCCCGGAAGAACAGAGGTTGAGCAACTGCACAAAATATATAAGTTATGCGGCTCTCCATCAGAGGCATATTGGAAGAAATATAAATTACCAAATGCTACTCTCTTTAAGCCACAACATCCTTATAGAAGGCGCATCTCAGAAACATTTGCGGATTTTCCGTCTTCTTCATTACCTTTAATTGAAACTCTACTTGCAATAGATCCTGATGCTCGCGGCACTACCTCATCTGCTCTAAATAGTGAATTCTTTACCACTGAGCCCTATGCTTGCGAACCGTCGAGTTTACCAAAGTATCCTCCCACCAAAGAATTGGATGTAAAGCTGAGGGATGAAGCAAGAAGGCAAAGAGCTCTAAATGGCAAAACTAGTGCAGTTGACGGTGTTGGACAAGTTAGAGTCCGTGAGCGCGGTTATGCAATTCCAGCCCCAGAAGCAAATGCAGAGATCCAAACAAACTTAGATAGGTTGAGAGTTGTGACACATGCAGATGGAAAAAGTAAAAGTGAAAAATTTCCACCTCCTCATGAGGATGGAGCTGTTGGATATCCCGGGGAGGCTTCGAATAGAGGAGCTACTTCATTTGGAACAACCAAAACAAATTCCTTTAGCTCAATATTATCTAACTCAATACATTCTAAATCTGTTGGAAGTTTTGCAGCCAGATCTTATAAAGGTTGGAGAAGTGGTGAAGCAGATTCCAAGTTATCATCGTGGAAATTTATGCGTTCTTTCAAGCCTTCAACGGTTGGTCTTTCATTTAATTTATTATTTGGAAGCAGAAGATAA 1671 0.4345 MGCALGKPAGAGDRHRRRDNTVTSDGGNNAVKVGEKKETEASNAGELSGNVPATVTRLPRINSLAATQPSWPPWLMEVAGDAIRDWAPRRANTFEKLAKIGKGTYSNVYKAKDLITGKIVALKKVRIDNMEAESIKFMAREILVLRKLDHPNVIKLEGLVTSRISSSLYLVFEYMEHDLSGLIAGIGVKFSEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDDKGILKIADFGLATFYDSKQKHAMTSRVVTLWYRPPELLLGATFYGVGIDLWSAGCILAELLGGKPIMPGRTEVEQLHKIYKLCGSPSEAYWKKYKLPNATLFKPQHPYRRRISETFADFPSSSLPLIETLLAIDPDARGTTSSALNSEFFTTEPYACEPSSLPKYPPTKELDVKLRDEARRQRALNGKTSAVDGVGQVRVRERGYAIPAPEANAEIQTNLDRLRVVTHADGKSKSEKFPPPHEDGAVGYPGEASNRGATSFGTTKTNSFSSILSNSIHSKSVGSFAARSYKGWRSGEADSKLSSWKFMRSFKPSTVGLSFNLLFGSRR* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0708 556 Gene3D Transferase(Phosphotransferase) domain 1 177 418 - -
Tpr3g0708 556 Pfam Protein kinase domain 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0708 556 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 47 516 - -
Tpr3g0708 556 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Tpr3g0708 556 MobiDBLite consensus disorder prediction 1 50 - -
Tpr3g0708 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Tpr3g0708 556 PANTHER CELL DIVISION PROTEIN KINASE 47 516 - -
Tpr3g0708 556 SUPERFAMILY Protein kinase-like (PK-like) 88 383 IPR011009 -
Tpr3g0708 556 ProSiteProfiles Protein kinase domain profile. 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0708 556 Gene3D Phosphorylase Kinase; domain 1 80 176 - -
Tpr3g0708 556 CDD STKc_CDK9_like 94 378 - -
Tpr3g0708 556 SMART serkin_6 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0708 Tpr-Chr3 6822131 6825919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0708 86 410 Core Cell Cycle Gene Families AT5G10270 51.613 2.81e-117 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Tpr3g0708 Pkinase 1.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0708 K08819 - gmx:100789359 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0708 3 6822131 6825919 Tpr3g0708 3 6822131 6825919 ECH