Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0706 ATGGATAAGCTTAATTTTATTAAAAATGGAGTGAGTAGATTACCTCCTGGATTTCGTTTTCAACCAACAGATGAAGAACTTGTGTTTCAATATTTGAAATGTAAGATTTTCTCATGCCCTTTGCCTGCTTCCATCATTCCTGAGGTCAATGTTTGCAAATATGATCCTTGGGATTTGCCAGGAGGTTGTGATGAACAAGAGAGGCACTTTTTTAGTTCAAAAGAATCAAAGAATAGAAATAGTAATAGAATGAGTAGAACAACAAAATGTGGATATTGGAAGGCAACAGGGTCAGACAAAAGAATTTCATCTTCAACTTGCAATGGCATTATTGGGCTAAGAAAAACTCTAGTTTTTTATGAAGGAAAATCTCCAAATGGGTCTAGAACTAATTGGATCTTACATGAATATCGTCTCATCAATGTGGAAAGTCCCACCAACTCAACTCAGAACTATGGAAATGAGATAGGAGATTGGGTTTTGTGTCGGTTATCTATGAGGAAAAGAAGTTTAGAATATGGAAGCACTAGTACTCATAATAATGCTACTAATAATTCAAGATTAATGTTTGATTTTATGATGGTAAACAACAACAAGACATGTTCTTCTACTTCCTCTTCATGTTCAAGTTCTAGTAACAACAACATTGAGGTCTCTTCAAATCATCACGAAAATGGCTATGCTGATTTTTAA 693 0.3434 MDKLNFIKNGVSRLPPGFRFQPTDEELVFQYLKCKIFSCPLPASIIPEVNVCKYDPWDLPGGCDEQERHFFSSKESKNRNSNRMSRTTKCGYWKATGSDKRISSSTCNGIIGLRKTLVFYEGKSPNGSRTNWILHEYRLINVESPTNSTQNYGNEIGDWVLCRLSMRKRSLEYGSTSTHNNATNNSRLMFDFMMVNNNKTCSSTSSSCSSSSNNNIEVSSNHHENGYADF* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0706 230 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 230 - -
Tpr3g0706 230 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Tpr3g0706 230 Gene3D NAC domain 23 173 IPR036093 GO:0003677|GO:0006355
Tpr3g0706 230 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Tpr3g0706 230 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 230 - -
Tpr3g0706 230 SUPERFAMILY NAC domain 10 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0706 Tpr-Chr3 6815542 6817264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0706 1 170 NAC Transcription Factor Family AT5G13180 60.234 5.34e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr3g0706 NAM 4.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0706 - - gmx:100812015 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0706 3 6815542 6817264 Tpr3g3294 3 36271230 36272751 ECH
Tpr3g0706 3 6815542 6817264 Tpr3g0706 3 6815542 6817264 ECH