Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0703 ATGATTAATGGTAGGTGTGCAGCTTGCAAGAATCAAAGAAGAAGGTGTCCTTCTGATTGCATTTTCTCTCCATATTTCCCTCCCAATGACCCTCAAAGATTTGCTTCTGTTCATCGAATCTATGGTGGTAGCAATGTGGGAAAAATGCTTCAGCAATTGCCTAACAATGTACGACAACAAGCTGCAAATACTTTGTATTTAGAAGCAAAATGTAGGATTCAAGATCCTGTTTATGGATGTGTTGGGATTATCTCTAAATTGTATGAACAAATCCATGATACAGAAATTGAGCTGGCCAAAATCCAAACTCAAATTGCTTGTCATAAACCCCAAAATCCACAATTTGAAGCTGAATCAAATTTCAATGACTTGTCCACAGTTGATGCTGAATTAAATTTGAACTTTTTACCACCACAAAGCAGCAGCATGGAGCAGTTCCATTGGCCTAGTCAAGATCCTAACTGGTTCAATTAA 474 0.3776 MINGRCAACKNQRRRCPSDCIFSPYFPPNDPQRFASVHRIYGGSNVGKMLQQLPNNVRQQAANTLYLEAKCRIQDPVYGCVGIISKLYEQIHDTEIELAKIQTQIACHKPQNPQFEAESNFNDLSTVDAELNLNFLPPQSSSMEQFHWPSQDPNWFN* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0703 157 Coils Coil 84 104 - -
Tpr3g0703 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 116 - -
Tpr3g0703 157 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Tpr3g0703 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 116 - -
Tpr3g0703 157 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0703 Tpr-Chr3 6767895 6771880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0703 5 106 AS2 family AT3G26660 68.627 1.73e-49 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tpr3g0703 LOB 1.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0703 - - ccaj:109810657 231.876