Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0700 ATGGATTTTGTGAAGAAGTGTAAGAGGGTATTGGGAAGCAACAAGAGATTGTATGATTCAGAAGAAAGTAGTGAAAGTGGAAGTGGAAGCTATGGAAAATTATCAGAGAACAAGTGTCACAAAAAACAAAAGGATATTAATAGTAAGAAATTAGCACCAAATGGTTGTATTTGTGTCTATGTTGGATCTGAGAGACAGAGATTTGTAATAAAGATCAAAATATTCAATCATCCTTTGTTCAAAACATTTTTAGAAGATGTTGAGAATGAATATGGTTATACAAATGATGGTCCTTTATGGCTTCCTTGTCATGTTGACTTATTTTGTGAAGCACTTTTGGAGATAGAGAGTGATGATATGGGTCACAAACACAGCCCAGTTTCTCATTCTTCATTTTCTTGTCGATCTAATAACCTGAACTGTGATGTAAATTACCAGGTTTTGGTATAG 450 0.3378 MDFVKKCKRVLGSNKRLYDSEESSESGSGSYGKLSENKCHKKQKDINSKKLAPNGCICVYVGSERQRFVIKIKIFNHPLFKTFLEDVENEYGYTNDGPLWLPCHVDLFCEALLEIESDDMGHKHSPVSHSSFSCRSNNLNCDVNYQVLV* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0700 149 PANTHER SMALL AUXIN-UP RNA-RELATED 1 128 - -
Tpr3g0700 149 Pfam Auxin responsive protein 30 112 IPR003676 GO:0009733
Tpr3g0700 149 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 128 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0700 Tpr-Chr3 6739874 6740323 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0700 53 108 Calmodulin-binding Proteins AT4G34750 46.429 5.26e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0700 K14488 - cam:101489648 187.963