Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0699 ATGGATTTTGTGAAGAAATGTAAGAAAGTATGGGGAAGCAACAAGAGATTATATGATCATCAAGAAAGTAGTACTAGTGGAAGCTATGGAAAATTATCAGAAAAGAGCCGTAAAAAGGATATTACTAGTAAGAAATTAGCACCAAATGGTTGTATTTGTGTCTATGTTGGACCTGAGAGACAGAGATTTGTGATCAAGATTAAAATATTCAATCATCCTTTGTTCAAAACATTTTTAGAAGATGTTGAGAATGAATATGGTTATACAAATGATGGTCCTTTATGGCTTCCTTGTCATGTTGACTTGTTTTGTGAGGCATTGATGGAGATGGAGAGTGATGAGAATGTGGGTTGCAATTTTCAAAAGAGTCATAAACACAACTCTGTTTCACCTTCTTCATTGTCTTGTCGTTCTAATAACATGAGTTGTAGTGATGTTAATTACCAGCTTTTGGTATAA 459 0.3377 MDFVKKCKKVWGSNKRLYDHQESSTSGSYGKLSEKSRKKDITSKKLAPNGCICVYVGPERQRFVIKIKIFNHPLFKTFLEDVENEYGYTNDGPLWLPCHVDLFCEALMEMESDENVGCNFQKSHKHNSVSPSSLSCRSNNMSCSDVNYQLLV* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0699 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 144 IPR003676 GO:0009733
Tpr3g0699 152 Pfam Auxin responsive protein 28 107 IPR003676 GO:0009733
Tpr3g0699 152 PANTHER SMALL AUXIN-UP RNA-RELATED 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0699 Tpr-Chr3 6735429 6736018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0699 48 103 Calmodulin-binding Proteins AT4G34750 46.429 6.62e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0699 K14488 - cam:101489648 200.29