Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0698 ATGGATTTTGTGAAGAAGTGTAAGAGGGCATGTGGAAGTAGCAAGAAATTGTATCCAGAAGAAAGTAGTGGCAGTGGAAGCAGCTATGGCAAATCATCAGAAAAGTGTCACAAAAAGGATATTAGTAATAAGAAACCACCAAATGGTTATCTTTGTGTATATGTTGGACCTGAGAGACAGAGATTTGTAATAAAGATCAAAATATTCAACCATCCTTTGTTCAAAACACTTTTAGAAGATGTTGAGAATGAATATGGTTATACAAATGATGGTCCTCTATGGTTTCCTTGTGATGTTGAGTTGTTCTGTGAGACACTTGTGGAAATAGAGAGTGTTTAA 339 0.354 MDFVKKCKRACGSSKKLYPEESSGSGSSYGKSSEKCHKKDISNKKPPNGYLCVYVGPERQRFVIKIKIFNHPLFKTLLEDVENEYGYTNDGPLWFPCDVELFCETLVEIESV* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0698 112 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 111 IPR003676 GO:0009733
Tpr3g0698 112 MobiDBLite consensus disorder prediction 15 41 - -
Tpr3g0698 112 Pfam Auxin responsive protein 32 105 IPR003676 GO:0009733
Tpr3g0698 112 PANTHER SMALL AUXIN-UP RNA-RELATED 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0698 Tpr-Chr3 6729289 6729627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0698 47 102 Calmodulin-binding Proteins AT3G43120 55.357 2.20e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0698 K14488 - cam:101489648 163.31