Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0696 ATGGATTTTGTGAAGAAGTGTAAGAGGGTATTGGGAAGCAACAAGAGATTGTATGATTCAGAAGAAAGTAGTGGTGGAAGTGGAAGAAGCTATGGAAAATTATCAGAGAACAAGTGTCACAAAAAACAAAAGGATATTAATAGTAAGAAATTAGCACCAAATGGTTGTATTTGTGTCTATGTTGGATCTGAGAGACAGAGATTTGTAATAAAGATCAAAATATTCAATCATCCTTTGTTCAAAACATTTTTAGAAGATGTTGAGAATGAATATGGTTATACAAATGATGGTCCTTTATGGCTTCCTTGTCATGTTGACTTATTTTGTGAAGCACTTTTGGAGATAGAGAGTGATGATATGGGTCACAAACACAGCCCAGTTTCTCATTCTTCATTTTCTTGTCGCTCTTCTTATAATCTGACTTGTGATGTCAATTACGAGGTTTTGGTTTTGGAGCAATTATCATTGATCTCTGCCATTGTTATAGCTTACATTGATCAATTTCACAAACAGTTTTCTGTTTTCTTTTCTCTGCAAGATCTTCAAAGATCTTGA 555 0.3387 MDFVKKCKRVLGSNKRLYDSEESSGGSGRSYGKLSENKCHKKQKDINSKKLAPNGCICVYVGSERQRFVIKIKIFNHPLFKTFLEDVENEYGYTNDGPLWLPCHVDLFCEALLEIESDDMGHKHSPVSHSSFSCRSSYNLTCDVNYEVLVLEQLSLISAIVIAYIDQFHKQFSVFFSLQDLQRS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0696 184 Pfam Auxin responsive protein 33 112 IPR003676 GO:0009733
Tpr3g0696 184 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 134 IPR003676 GO:0009733
Tpr3g0696 184 PANTHER SMALL AUXIN-UP RNA-RELATED 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0696 Tpr-Chr3 6694836 6695895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0696 53 108 Calmodulin-binding Proteins AT4G34750 46.429 1.19e-14 66.2