Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0686 ATGCATGATTTATGCTATAGTCCTCGTTTTATTACTTCTAAATCAATAATGGAGAGACATGAAGTGATATTTCCTATCTCATCTTCAAAAGATGCTTCTCCTATTGATGTTAAACCCGGTAATGCCTCTAATATTCATGCTAAAAAGGCAGAATTATTTCTGAAAACTATAAGGAAGGAGACATCAAAGCAGAAAGGAGGCAAAGAAATCATGAAGCATAGATATGTATTTCAAACAAGGAGTCAGATTGATATACTAGACGATGGGTTCCGATGGAGAAAGTATGGCGAAAAGTCGGTGAAAAACAACAAATTTCCTAGAAGTTACTACAAATGCACTTATCGAGGCTGCAATGTAAAGAAACAAATCCAAAGGCATTCCAAAGAGGAGCAGATTGTGGAAACAACGTACGAAGGAGTGCATATTCACCCTGTCGAGAAGTCAACTGAAAGCTTCGACCAGATCTTGAGAAACTTTATTACAAGCAATCAACTATATAATGTAACTGCAATGTAA 516 0.3624 MHDLCYSPRFITSKSIMERHEVIFPISSSKDASPIDVKPGNASNIHAKKAELFLKTIRKETSKQKGGKEIMKHRYVFQTRSQIDILDDGFRWRKYGEKSVKNNKFPRSYYKCTYRGCNVKKQIQRHSKEEQIVETTYEGVHIHPVEKSTESFDQILRNFITSNQLYNVTAM* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0686 171 ProSiteProfiles WRKY domain profile. 81 146 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g0686 171 SMART WRKY_cls 86 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g0686 171 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 17 162 - -
Tpr3g0686 171 Gene3D WRKY domain 73 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g0686 171 SUPERFAMILY WRKY DNA-binding domain 78 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g0686 171 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 17 162 IPR044810 GO:0003700
Tpr3g0686 171 Pfam WRKY DNA -binding domain 87 143 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0686 Tpr-Chr3 6603705 6604766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0686 74 167 WRKY Transcription Factor Family AT5G13080 69.149 7.92e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g0686 WRKY 7.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0686 - - gmx:100127378 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0686 3 6603705 6604766 Tpr3g0686 3 6603705 6604766 ECH