Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0667 ATGACGATTGATGCTTCTACAACAATGTACATGGATCAGCTGGTGACCCAAAGTAATGTTAAAAAGCCAATGTGGTTTGATGCTTTTCTGAAGGAAAATTTCTTTGAATCATGTTCTACTCACCCGTTGCGCAAGAACGAGTTAAAGAAGTATTGTATAAACTGCAATATGCTAATCTGTCAACATTGTGTATCTTTTGGTCTTCATCGATACCACGAGATTCTGAAGGTACATAGACATCTTTGCAAGGAAGTTGTCCCCCTGCGTGCTATTAAGAAACACTTTGACTGTTCGCTGATTCAGATCTATAAAAGGCACGGGCAAGCAGTTATTTCTCTGAATCCTGTCAAACTCAATGAGTTAGGGTTAGATGCAGCAGAATCATGCCAAGTTTGCAACAGAAGGCTGAATGTACCAGATTTATATCGCTACTGCTCGATTACTTGCAAGGTCGAATCTGTTTCAAAAAAGTCCAAGCTTGAGAATCCAGTTAGCACAACACCAGTTGAATCTTCCTCGGTACCTTCCATCCAGAGTCCTCCTCCTCCCCCTCCTCGTCGTCCTCAGGGAACACTAGAGGGCGTCTCTGAATTCTCTTTCCGAAAAAGGAAAAGGAAGGGAATTCCGCAGAGAGCTCCATTATTCTGA 648 0.4244 MTIDASTTMYMDQLVTQSNVKKPMWFDAFLKENFFESCSTHPLRKNELKKYCINCNMLICQHCVSFGLHRYHEILKVHRHLCKEVVPLRAIKKHFDCSLIQIYKRHGQAVISLNPVKLNELGLDAAESCQVCNRRLNVPDLYRYCSITCKVESVSKKSKLENPVSTTPVESSSVPSIQSPPPPPPRRPQGTLEGVSEFSFRKRKRKGIPQRAPLF* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0667 215 Gene3D Classic Zinc Finger 37 80 - -
Tpr3g0667 215 ProSiteProfiles Zinc finger B-box type profile. 38 77 IPR000315 GO:0008270
Tpr3g0667 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 215 - -
Tpr3g0667 215 MobiDBLite consensus disorder prediction 175 189 - -
Tpr3g0667 215 Pfam PLATZ transcription factor 79 151 IPR006734 -
Tpr3g0667 215 SUPERFAMILY B-box zinc-binding domain 37 80 - -
Tpr3g0667 215 PANTHER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE-RELATED 8 215 - -
Tpr3g0667 215 MobiDBLite consensus disorder prediction 160 174 - -
Tpr3g0667 215 CDD Bbox2 38 77 - -
Tpr3g0667 215 MobiDBLite consensus disorder prediction 160 215 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tpr3g0667 PLATZ 5.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0667 - - lang:109355923 164.081