Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0661 ATGAAGTTGTTGTGTACTTCATTGTTGTTTTTGGGTTTGGTTTCTATGCTCTCTTTTGTAGCTTCTGGTTTGGTGGCATCAAATGAAGTTTCGGCGCTTACAACCTTCAAAGAAGCTGTGTATGAGGATCCACTTATGGTTTTGTCCGATTGGAATACTTTGGATTCAGATCCTTGTGACTGGAATGGAGTTTCATGCACCGAGTCTGGAGATCATGTCATCAAGCTAAACATGTCAGGGGCATTACTAAGAGGGTTTCTTGCTCCAGAAATTGGGAAAATAACCTACTTGCAAGAACTAATCCTGGATGGTAACAAACTCATTGGAATAATACCGAAAGAATGGAGCGCCTTAAAATCGCTTAAGGTGTTGGATTTGGGAAAAAATCAGTTATCAGGACCAATTCCTCCAGAGATTGGAAATTTGACCGAAATCGTAAAAATAAATATGCGTTCCAATGGTTTGACTGGTAGGTTACCTCCAGAGCTTGCAAATTTGAAATACCTTCAAGAACTTCGGTTAGATAGGAATAAGCTTGAAGGGTCTATTCCTGCTTCTAGAACTTCAAATTCTCCTTCAAATAAGCATCAAATGTATGCCTCAAATGCAAATTCGACTGGCTTCTGTCGTTTGTCACTTAAATTTGCAGATTTTTCATATAACTTTTTGGTTGGTAGCATACCGAAATGCTTGGAGTATCTTCCAAGAACTAGCTTTCAAGGGAATTGCCTCCATGTCAAAGACATAAAACAGCGGACTAAAGTTCAATGTGCTGGAGCTTCACCTGCTCAGGGCCATCCAGTAGTGAAGCCCCATTCTAAAGCTGTACATTTATCAAAGCATAAAGGAAGCTCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGCGACCGGAACCATGGTTGGTGCTCTCTTTCTGATTGGTATTCTCACTGCCATACAAAGATGTAACAACAAATCATCCATCATTATTCCTTGGAAGAAATCTGCAAGCGAAAAAGAGCAAATTGCAGTATCTATAGATTCTGAGATGTTGAAAGATGTGACGAGGTATAGCAGACAAGAGCTTGAGGTGGCTTGCGAAGACTTCAGCAACATAATCGGATCCTCGCCGGATAGTGTGGTCTACAAAGGTACAATGAAAGGTGGACCTGAGATTGCTGCAATTTCCCTCTGCATCAAGGAAGAGAATTGGACTGGACACCTTGAACTTTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGATAAATCATGAGAATACAGGAAAGCTACTAGGCTATTGTAGTGAGAGCAGTCCATTTACAAGGATGCTGGTTTTTGATTATGCATCAAATGGCACACTTTATGAACTCTTACATTGTTATGAAGAAGGGTTCCAGTTATCATGGACGCGGCGCATGAAAATTATCATAGGCATTGCGCGGGGACTAAAGTATTTGCACACTGAAATTGAACCTCCGTTCACTATCTCAGAGTTGAATTCCAATGCTATATACCTTACAGAAGATTTTTCCCCCAAGCTGGTTGATTTTGAAAGTTGGAAGACGATTCTCGAAAGATCAGAAAAAAATTCTGGTTCCGTTAGCAGCCAAGGCACTGTTTGTACTCTTCCAAACTCACTTCAAGCACGTTATCTTGATACCAAAGGAAATATTTATGCTTTTGCAGTACTTGTACTTGAGATTATCAGTGGGAGATCTCCATACTGCAAGGACGAAGGGTACTTAATGGATTGGGCTAGGGATTATCTTGAATTGCCAGAAGTAATGTCAAATTTGGTGGATCCTGAGTTGAAACATTTTGGATCTGATGATCTCAAAGTATTATGTGAGGTGATAACACTTTGTATTAGTCCTGAACCTGATGTATGTCCATCAATGAGAGAATTATGCAGCATGCTAGAGAGCAGAATTGACACATCAATAAGTGTGGAGCTCAAATCTTTAGCTTGGGCTGAACTAGCACTTTCACCATAA 1977 0.4041 MKLLCTSLLFLGLVSMLSFVASGLVASNEVSALTTFKEAVYEDPLMVLSDWNTLDSDPCDWNGVSCTESGDHVIKLNMSGALLRGFLAPEIGKITYLQELILDGNKLIGIIPKEWSALKSLKVLDLGKNQLSGPIPPEIGNLTEIVKINMRSNGLTGRLPPELANLKYLQELRLDRNKLEGSIPASRTSNSPSNKHQMYASNANSTGFCRLSLKFADFSYNFLVGSIPKCLEYLPRTSFQGNCLHVKDIKQRTKVQCAGASPAQGHPVVKPHSKAVHLSKHKGSSKPAWLLALEIATGTMVGALFLIGILTAIQRCNNKSSIIIPWKKSASEKEQIAVSIDSEMLKDVTRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAAISLCIKEENWTGHLELYFQREVADLARINHENTGKLLGYCSESSPFTRMLVFDYASNGTLYELLHCYEEGFQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAIYLTEDFSPKLVDFESWKTILERSEKNSGSVSSQGTVCTLPNSLQARYLDTKGNIYAFAVLVLEIISGRSPYCKDEGYLMDWARDYLELPEVMSNLVDPELKHFGSDDLKVLCEVITLCISPEPDVCPSMRELCSMLESRIDTSISVELKSLAWAELALSP* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0661 658 SUPERFAMILY Protein kinase-like (PK-like) 341 635 IPR011009 -
Tpr3g0661 658 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 657 - -
Tpr3g0661 658 Gene3D Ribonuclease Inhibitor 24 263 IPR032675 -
Tpr3g0661 658 Gene3D Phosphorylase Kinase; domain 1 333 442 - -
Tpr3g0661 658 Pfam Protein tyrosine and serine/threonine kinase 364 632 IPR001245 GO:0004672|GO:0006468
Tpr3g0661 658 SUPERFAMILY L domain-like 28 235 - -
Tpr3g0661 658 ProSiteProfiles Protein kinase domain profile. 361 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0661 658 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Tpr3g0661 658 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Tpr3g0661 658 PANTHER PROTEIN MALE DISCOVERER 2 7 657 - -
Tpr3g0661 658 Gene3D Transferase(Phosphotransferase) domain 1 443 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0661 Tpr-Chr3 6409833 6414495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0661 1 640 Receptor kinase-like Gene Family AT2G35620 28.311 1.01e-54 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Tpr3g0661 PK_Tyr_Ser-Thr 1.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0661 - - gmx:100781978 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0661 3 6409833 6414495 Tpr3g0661 3 6409833 6414495 ECH
Tpr2g3867 2 41452939 41457086 Tpr3g0661 3 6409833 6414495 PCT