Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0646 ATGTCTGGATGCAATAAATCACCTAAAAATGATCAACATTCAATCAAATATCGGTGGATTCAACATGGAGGGGCATCCTCTAAGGCTGATCTTTCTCGTGTAGATTGTTCACCTCCTCTTTCCAATAATGAGAACAAGCAATGCTATAGAAGTTCTCAACTGAAGTCCCCTGAAATACTGACCACGCCGCAGCTCATCTCTGCAATAGGCCAGTTATGGGATTCTGCTAGTCGCCCACTTTCATTTTTACTCCCGAAGGAAAATGTAAATAAAGATGATAAAGGATTCTCAAAAGAGAATATTCTGGGTAACATTCATGAGAATAACAATGGTGTGGTTACTTCAAATAAAACTAATTACTATTCTGTTAATCCGGGCACTACTTGCTTCGGTTCACAAATTGTGCAGGAAAAATTGGATTTCCCTAAGGTAACACAGAAGATGTTAATACTTGAATCGTCTTATGGAAGTCAAGATTATATACATTCTTTATTCCATAGATTTTCACAGGCAAGTGATAAAAATTCAAATGAATATTGTGATAAACTGGAACTTGAGAGTGAAGAAATTTCGTTTAGATCAGGAAATGTTCCTAGTGAGCTAAACTGTCATGCAAAGGTTACTGAGCCTGAGAACCTGAAAACTAATTCTTTGGTTGCCAGAGACTGCATTTCAATAGACGCAAGCCCCATTTCATTGGCTAATGAAAGGGATGTATGCGATCCTGATGTACTCATATGTGAAGCTCCATCATTAACTAATGATGCAGTTCTGAACACAAAAGAAGTTAACCCTCTGTGTTCAGACTATTTTCTTCAAGTTGTGCCTCATAATCAGATGGATGTTGGTGCTTGTCAGACCCTATCTTCTAGTATCTACGCAGACTATCATATTGTCAACTCTTTAGCTACCTGTAACACTGCTAACACTGCTTCTGTGCAGTGTCAATGTAAGATTGATGATGATGAAAATGAATTAATGGAAATTCAAAGAAGCCATTTATCAGATATAACCAGTGATGAACCTAAGCTTCAGACCTTCTCTGCAACCCATCAGAAGCCTTCCCATTCCCTTGCCAAGCAAGAACATGCTTTTTCTGGAGCGTTGGCTGGAATATGTGTCAGCTGTTGTCTGCATCCTGTTGACACAATCAAGACAGTTGTTCAATCATGTCGTGCAGAACAGAGGTCCATCTTTTACATTGGCAAATCAATTATTTCTGATAGAGGTTTTCCTGGACTATATCGTGGAATTACTACAAACATTGCATGTTCAGCTCCAATTTCTGCAGTTTATACTTTCACGTATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGAATTATTCTTTTGCCCATTGTGTTGGAGGTGGTTGTGCAAGCATTGCCACATCTTTCATCTTCACTCCTAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGATCTCATTATCGCAACTGCTGGGATGTATTGATCGGAATTATCAGAAATGGTGGTCTTTCCTCGCTATATGCAGGTTGGAGAGCTGTACTATGCCGAAATATCCCACATTCAATGATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCTTCTAGTATTCAATCCCACACATTTCAGACTTTAGTGTGTGGAGGATTAGCTGGAACGACTGCTGCTTTATTCACGACTCCGTTTGATGTGATCAAGACAAGATTACAGACACAGATTCCTGGATCAAGAAATCAATATGATAGTGTGTTCCATGCCCTTTACCAAATTAGCAAGACCGAAGGTTTGAAGGGCTTATACAGGGGATTGACTCCAAGGTTGATTATGTACATGTCTCAAGGATCATTGTTCTTTGCTTCATACGAATTTTTCAAGAGTGTATTTTCTCTGGAAGCATCACTTCCCACTGGTTTATAA 1926 0.3915 MSGCNKSPKNDQHSIKYRWIQHGGASSKADLSRVDCSPPLSNNENKQCYRSSQLKSPEILTTPQLISAIGQLWDSASRPLSFLLPKENVNKDDKGFSKENILGNIHENNNGVVTSNKTNYYSVNPGTTCFGSQIVQEKLDFPKVTQKMLILESSYGSQDYIHSLFHRFSQASDKNSNEYCDKLELESEEISFRSGNVPSELNCHAKVTEPENLKTNSLVARDCISIDASPISLANERDVCDPDVLICEAPSLTNDAVLNTKEVNPLCSDYFLQVVPHNQMDVGACQTLSSSIYADYHIVNSLATCNTANTASVQCQCKIDDDENELMEIQRSHLSDITSDEPKLQTFSATHQKPSHSLAKQEHAFSGALAGICVSCCLHPVDTIKTVVQSCRAEQRSIFYIGKSIISDRGFPGLYRGITTNIACSAPISAVYTFTYESVKAALLPYLPKENYSFAHCVGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLIGIIRNGGLSSLYAGWRAVLCRNIPHSMIKFYTYESLKQVMPSSSIQSHTFQTLVCGGLAGTTAALFTTPFDVIKTRLQTQIPGSRNQYDSVFHALYQISKTEGLKGLYRGLTPRLIMYMSQGSLFFASYEFFKSVFSLEASLPTGL* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0646 641 ProSiteProfiles Solute carrier (Solcar) repeat profile. 358 442 IPR018108 -
Tpr3g0646 641 SUPERFAMILY Mitochondrial carrier 362 627 IPR023395 -
Tpr3g0646 641 ProSiteProfiles Solute carrier (Solcar) repeat profile. 451 534 IPR018108 -
Tpr3g0646 641 Pfam Mitochondrial carrier protein 453 536 IPR018108 -
Tpr3g0646 641 Pfam Mitochondrial carrier protein 362 443 IPR018108 -
Tpr3g0646 641 Pfam Mitochondrial carrier protein 543 632 IPR018108 -
Tpr3g0646 641 Gene3D Mitochondrial carrier domain 339 484 IPR023395 -
Tpr3g0646 641 Gene3D Mitochondrial carrier domain 485 640 IPR023395 -
Tpr3g0646 641 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 636 - -
Tpr3g0646 641 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 636 - -
Tpr3g0646 641 ProSiteProfiles Solute carrier (Solcar) repeat profile. 542 630 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0646 Tpr-Chr3 6312815 6317613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0646 341 631 Chloroplast and Mitochondria Gene Families AT1G07030 33.987 2.82e-34 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0646 - - pvu:PHAVU_002G289600g 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0646 3 6312815 6317613 Tpr3g0646 3 6312815 6317613 ECH