Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0641 ATGGAGAGAAGATCTCCTCCTCTGGTGAACCAAAAATGCACATCGCGGATGTTTGGAATCTTTAATTTTCGTGAAGCTCATTCCGATGAAACATTGGTTTCCGATAGGCGCCATTTGAATAAACACGCCGGTGCTGCAGGAAATGGAAAATCCAGAATTAGTTCAGATGTGCTTAGCACAGTTGATGAAAAGTACCCTCATGCTGATGTAACTTCGAGAAGAAGAAGAGGTTATAGTTGTAAGAGTATCTGTGTGGAGAATGATCAGATAGTAAATTTGGAAAATGAAGCAACAAAAATGATTGTTAACCAGAGATTTTTCGACAAAAATTCTCAAGGCAAAGATGGTGGTCCAGACTCTCAGCCTAATCAATTTTTGGATGCTGTACAGATTTTATATTCAAACAAGGAACTTTTCACAAAACTTCTGCAAGATCCAAACTCACTATTGGTAAAAAAGATTCATGGCTTACAGAAACCTCAAGTAAAAGCTGAACAAAATGGAATGAACAGCTTGAATAAAGATCAAAACAGTAGTGATTTTGATAGGTGCAATTTGAGTAAAGATTGCGAGTCACGGTCCTCTAAAAGAATAGTAGTTTTGAAGCCTGGCACAAATAATGTGAAAAAATTTGCTGACAATAAAGATGCTCGAAATATGAAGCCTTCACAGTTTGCATTTGGCGGTATAAAGAGAAAGTTGAGATATGTCATGAGAGTATGGAAAAAAGAGCAGCAGTGGATGGCAACTGATTCGGCGTCAAGTAAATTTCGCTGCTGTTCACAGAACTTGGAAGATGATAAAAATGTAAAAAAATTGGACATTGCTGTAAGAAATTCGCTAAATAATGTCCATGTTAGTACTGGAAAGAATTTGAAGGATTCCAAGTTGAAGGACCCTAAGTTGAGTGTGAGACAGGAAGTTGCTTCTCAGCAAAATAAATTGACCATGAAGGACCAAGGTGCAAAAGTTACATCTCACAACAAACACCAAATGGTTCTTAAAACATTTCATAGAGATGGCGAAAGTTGTTCTTATACAAGTTCTTCTTCTCAGAAAATCAAGGATCCACCAGTAGTATCTTTTAGTGATGAGTTACAGGTTTTTGATGCGGCAGATATTTGTGTCAATTCGAATCTTCCTGTTGACAATTTGCATGCACATTACGATATTCCAAGAGATGGATTACTAGTACAAGTTGCACATGATAAATTTAAAGAGAACAACCTTGCAGACCGTGTAACATCCTCTTTGGATCCAATGAGCAGCTCAAAGGACATCATGAGGGAAGTTCTGCAGGCTTTCATCTTGAAATGTGATGAACCTGTAAAGAGTCATTTATCAAACCTATTGATGGATTCATCCACTTTTGATGAACTGAAGGGATTAACTGATGATCTTTCTTGCAGTACAATCCTGCATGACTGTATCATCGAATGTTTCATGGAGTTATACCAAAACTGTGGTTTCCAATCTCATTTTTCATCAAGAAATCCAAACTTTCAATCATGCGTTGCGAGGAAAATTTTGGTTAGAGAGATTAATGAACTTGTTAACCTGCACTTTTATCCTCATCCACCAATAAAGTTACAAGAACTTGTTGAAAGGGACTTAGCAAGACGTGGATCATGGTTGAATAATATCCAAGTTGATGTAGAAGACATTGCAATTGAGGTGGAGAAAGATGTTTTGGAAAAACTGGTTTTAGAAATAGTCTATGAGATGGATATCAGAGACTTGATACATTGCAATTAA 1755 0.3692 MERRSPPLVNQKCTSRMFGIFNFREAHSDETLVSDRRHLNKHAGAAGNGKSRISSDVLSTVDEKYPHADVTSRRRRGYSCKSICVENDQIVNLENEATKMIVNQRFFDKNSQGKDGGPDSQPNQFLDAVQILYSNKELFTKLLQDPNSLLVKKIHGLQKPQVKAEQNGMNSLNKDQNSSDFDRCNLSKDCESRSSKRIVVLKPGTNNVKKFADNKDARNMKPSQFAFGGIKRKLRYVMRVWKKEQQWMATDSASSKFRCCSQNLEDDKNVKKLDIAVRNSLNNVHVSTGKNLKDSKLKDPKLSVRQEVASQQNKLTMKDQGAKVTSHNKHQMVLKTFHRDGESCSYTSSSSQKIKDPPVVSFSDELQVFDAADICVNSNLPVDNLHAHYDIPRDGLLVQVAHDKFKENNLADRVTSSLDPMSSSKDIMREVLQAFILKCDEPVKSHLSNLLMDSSTFDELKGLTDDLSCSTILHDCIIECFMELYQNCGFQSHFSSRNPNFQSCVARKILVREINELVNLHFYPHPPIKLQELVERDLARRGSWLNNIQVDVEDIAIEVEKDVLEKLVLEIVYEMDIRDLIHCN* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0641 584 Pfam Protein of unknown function (DUF3741) 121 148 IPR022212 -
Tpr3g0641 584 Pfam Domain of unknown function (DUF4378) 430 570 IPR025486 -
Tpr3g0641 584 PANTHER DUF3741 FAMILY PROTEIN 93 327 - -
Tpr3g0641 584 PANTHER DUF3741 FAMILY PROTEIN 310 574 - -
Tpr3g0641 584 PANTHER DUF3741 FAMILY PROTEIN 4 92 - -
Tpr3g0641 584 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 4 92 - -
Tpr3g0641 584 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 310 574 - -
Tpr3g0641 584 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 93 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0641 Tpr-Chr3 6278208 6282253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0641 461 582 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 32.061 7.04e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0641 - - mtr:MTR_8g098335 768.844