Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0629 ATGGCAAACGGGTCTTCCCTTGATCGACTTGAAGCTAAAACTTTTACCGAATCTCATGGAAATGGCGATTGTCTTATCGAGGATTGTGTTGATAGTGCCGGTCATGACAAAGCTAAACAGAAGTCTTTGTTTTGTCAAATTTTTTCGGTTTATCTTAAAGAGAATTGTAGTAGAGGTAATGTTAAGCCTGTGCCTGTGATGCTCGGTGACGGTCAATTGCTTGATTTATACCAGCTTTTCTCCCTTGTGAAGGAAAAAGGTGGGTATGATGTGGTGTCGAGAAAAGGTTTGTGGGATTCTGTGATAGTTGAATTGGGTATGGATATTTGTGTTTTGGCTTCGGTGAAATTAGTTTATGACAAATATTTGCATGGTTTCGAAGCGTGGCTCAGCAAAACTTTTGATGAGAAGAGTTTAAAAAATGGGAATAATGGTTGTTTGAATTCATTGCCATTAGATCTGGAAAAAGAGTTTCGAAGCCTTTTATGCTCAAATCTAAAGGACAAAGATGATGATTTTGTCCCGTTAGAATCGAGCAACATCATAAAGCACATTGATTTGGTTAACCAAAAGAGTAGTGGTTATTTATTGAACTCCAAAAACCTAACCAACAAATGTTTGGATGTCCAACATGTTGATGGTTACAGTAATGATGATGACGATAAAAAATTTGGTAACGGTGTTAAGGTCGATCTACCTGCCTCTCGAAAACGTAAACGGGAATCAATATCAGGAATGGTAAACTGGACGAGGCATGTTGCAAAGCATCCGTTTGATCCTGTAACTCCTCCATTACCAGAACCATCAAAATGGAAGGAGTATAAAGGAGGCAATGACTTTTTTGTTCAGCTGCTGAGGGCAAGAGACGCTCTGGCGGTGAGAAAGAATGCAGAACCAAACAGTGGATCATCTTCTCAGAAGGTGAAGATGCATCCTGCCATGTATGAGGATTCCGTTGGTCACCAGGGTACTATGAAATTGAGATGTAGTGAAAGGCTGCCTATCTCTCCTAAATCTCGCTGCACTTGTTGCAATTCTAAATCATGCTCTGCTAATGGAAATAAGTTGCATGCTTCAGTCAATATGGCTGCCAAACCAGATGCTACTGAAAAGAAAAAATCGACTTCCAAATCAAAATCAAAATGGAGCAAAAAGAAAAAACCTGTGCCATCTGAGGATGATTTTCGTGTAAAGCATGTTTCTATAGGTAATCTTTTCCAAGCGGAAGTTCCGCAATGGACTGGTGAAGTTTCTGACAGTGACCCTAAATGGTTAGGCACACAAGTGTGGCCTGTTAAAGATGACTCAAAACTTACTACCAAAACAGAATTCATTGCGAGAGGAAGACGAGGAAAGTGTAGTTGCGACATTCAAGGTTCTGTTGACTGTGTCAGATTTCTCATTGCTGAAAACAGGATGAAACTGAAGCTTGAATTGGGTTCTGTATTTTACCAATGGGGATTTGATAAAATGGGCGAGGAAGTTTCACTTCAATGGACAGCTGATGAAGAAAAGAAATTTAAGAATGCAATGAGGTTAAATATCCCCTCCCAAAACAAGTCTTTTTGGAACAATCCATCCAAATACTTTTTTAAGAAGACAAGAAAAGACATGGTGAGCTATTACTTCAATGCATATATTATTCAACTAAGAACTTATCAGAATCGAGTAACTCCGAAGACTGTTGACAGTGATGACGACGAAGTCGAATTTGGATCTTTTGGTGATGGTTTTGGGAGAAACCGTATCAGGCATCCACCTGTGGAATTCATGGAGTGTTCAGAGAACAAGCAATGCTGGGATTATGAGTAG 1812 0.3957 MANGSSLDRLEAKTFTESHGNGDCLIEDCVDSAGHDKAKQKSLFCQIFSVYLKENCSRGNVKPVPVMLGDGQLLDLYQLFSLVKEKGGYDVVSRKGLWDSVIVELGMDICVLASVKLVYDKYLHGFEAWLSKTFDEKSLKNGNNGCLNSLPLDLEKEFRSLLCSNLKDKDDDFVPLESSNIIKHIDLVNQKSSGYLLNSKNLTNKCLDVQHVDGYSNDDDDKKFGNGVKVDLPASRKRKRESISGMVNWTRHVAKHPFDPVTPPLPEPSKWKEYKGGNDFFVQLLRARDALAVRKNAEPNSGSSSQKVKMHPAMYEDSVGHQGTMKLRCSERLPISPKSRCTCCNSKSCSANGNKLHASVNMAAKPDATEKKKSTSKSKSKWSKKKKPVPSEDDFRVKHVSIGNLFQAEVPQWTGEVSDSDPKWLGTQVWPVKDDSKLTTKTEFIARGRRGKCSCDIQGSVDCVRFLIAENRMKLKLELGSVFYQWGFDKMGEEVSLQWTADEEKKFKNAMRLNIPSQNKSFWNNPSKYFFKKTRKDMVSYYFNAYIIQLRTYQNRVTPKTVDSDDDEVEFGSFGDGFGRNRIRHPPVEFMECSENKQCWDYE* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0629 603 MobiDBLite consensus disorder prediction 363 390 - -
Tpr3g0629 603 SUPERFAMILY ARID-like 46 133 IPR036431 GO:0003677
Tpr3g0629 603 SMART ARID_2 35 127 - -
Tpr3g0629 603 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 5 603 - -
Tpr3g0629 603 CDD ARID 57 127 - -
Tpr3g0629 603 Pfam ARID/BRIGHT DNA binding domain 48 127 IPR001606 GO:0003677
Tpr3g0629 603 ProSiteProfiles ARID domain profile. 38 131 IPR001606 GO:0003677
Tpr3g0629 603 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 5 603 - -
Tpr3g0629 603 SMART bright_3 39 132 IPR001606 GO:0003677
Tpr3g0629 603 Gene3D - 27 141 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0629 Tpr-Chr3 6173117 6178505 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Tpr3g0629 ARID 6.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0629 - - mtr:MTR_1g073530 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0629 3 6173117 6178505 Tpr3g0629 3 6173117 6178505 ECH