Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0625 ATGTCTTCTGAACTCTATTCTTTTGGCACCACAACTTTCCACACTCATTCAACCTCAGAACATGTCTCTACTGATGGAACTGGAAGTGGAGACCTACCACCATTTTTTTCTGACTCTTTCCCTTTTTTCAACACTGAAGTTATTTCTCAACAAAATTCTAACTCATTATTTGATGAATCTCTTATTCCTTCTTCTCTAGACCCTTTTTCACCTTCTTTTTTCTCTTTCTCTCCTCCAACTGAAAACCTCACCATTTTTCATCATCAAACTAATAATAACAATGGAAGTTTCTCAGCTTTCGATATATCCGAAGTTAAAAACGAGGAATCACAAATAAGTATTGATTATTATAACAACTACAACAACAATAATACTCAATTTCTTCCACATAGTTATAGTGGTGTTGAAAATGTATCAAAGTACATGCAAAGAAGCTTCAGTAGTAACTCTTTTGAAAAGAAGCCAAATTTACTATTTCAAACTCACCATGATAATCTCGTTGATTCATCAAAATTTCAAAGACATGATTTAAGCTCTCCTGAAAATAGTTTGAGAAGGGTTTGTAGCACAGGTGATTTGCAGAACATCAAAGCAAATAATATGTCTCCAACAGAAGGAAATTTGCAAGAGGATCAGAATTTCAAAGTAGGACGTTACAGTGCAGAAGAAAGAAAAGAAAGAATTTCGAAATACAGAGCAAAGAGAACTCAGAGGAACTTTAACAAGACCATTAAGTATGCATGTAGAAAGACATTAGCGGATAATCGACCACGCGTACGTGGCAGGTTTGCGCGCAACGATGAGCCCAACGAGATTCCTAAGGCTCCATGTTTAATCAGAGATGAAGATGAAGTCAATTTTTGGATGGAAGAATTACGATTGCATGAAGATGATGTAACAGTGGGAGCAGCACAACAATATTTGAAGAGTAATAGCTATGGAGTTAGTCAGTTTCAGTATTTTGGCTTGTGA 972 0.358 MSSELYSFGTTTFHTHSTSEHVSTDGTGSGDLPPFFSDSFPFFNTEVISQQNSNSLFDESLIPSSLDPFSPSFFSFSPPTENLTIFHHQTNNNNGSFSAFDISEVKNEESQISIDYYNNYNNNNTQFLPHSYSGVENVSKYMQRSFSSNSFEKKPNLLFQTHHDNLVDSSKFQRHDLSSPENSLRRVCSTGDLQNIKANNMSPTEGNLQEDQNFKVGRYSAEERKERISKYRAKRTQRNFNKTIKYACRKTLADNRPRVRGRFARNDEPNEIPKAPCLIRDEDEVNFWMEELRLHEDDVTVGAAQQYLKSNSYGVSQFQYFGL* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0625 323 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 27 320 IPR045281 GO:0009909
Tpr3g0625 323 Pfam CCT motif 224 266 IPR010402 GO:0005515
Tpr3g0625 323 PANTHER CCT MOTIF FAMILY PROTEIN 27 320 - -
Tpr3g0625 323 ProSiteProfiles CCT domain profile. 224 266 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0625 Tpr-Chr3 6138409 6140348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0625 220 271 C2C2-CO-like Transcription Factor Family AT5G24930 50.000 5.40e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr3g0625 CCT 6.7e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0625 - - gmx:102665661 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0625 3 6138409 6140348 Tpr3g0625 3 6138409 6140348 ECH
Tpr2g3881 2 41564081 41565244 Tpr3g0625 3 6138409 6140348 PCT