Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0621 ATGGCTCATGAAGATGACAAAACATCAAGTGGTGGATTTTGTTACAATCCAACAATTCAAACACAAATTCATCAAGGTTTTGTTTCTGATCCAGAGATGTTTAATCTCACAACAGGGATGGAGATGATAGGGTTTTCAAAACATCTTCAACATCAACAACAACAACAACAACAGAGTTCTACTGACACAAACATGTGGAAAACAAATTTCATAGGAAAATTACCAAGTCAACACTCTGCAGGTGGTTCTTCAAAAACCATCAACAATGACTCAAATTTCTATCATCATCAAGATTTCACTACAAGTAGTGATCATCATCATCATCAAAATCTAAACAACATGATTCAACATCAACACCATCAGTGGCAACAACAACAACAGGTCGTTGCCACTGATGACGATTCATCACTAAGATGTGTTTTCCCTTGTGAAGGTAATGAAAGACCAAGTCAAGGACTTTCACTATCTCTTAGTTCAACAAATCCTTCATCTATTGGTTTACAATCCTTTGAACTAAGACACACTACTCCTCATACTCAACAAGATCAAGGGTATCATGGTCATTTTCTTCTCAAAAACTCTAAGTTTTTGTTACCAGCTCAACAACTTCTCAATGAGTTTTGTAGTTTAGAAACAACAAAACCAAATGATTTAGTTTTACAAAAACAAAAATCTCAAAAGTTCAACAACAACAAACAAAGTTGGGAAGATCAAGATATTAACAATGGTGGTGCTGGTGGGGGTGCTAGTAGCAGTTCCTCAACCAAACAATCTTTAACCTCTTTAGAGTTTGTTGAATTACAAAAGAGAAAAACTAAGCTTCTTTCCATGCTAGAAGAGGTTGATAGAAGGTACAAGAACTATTGTAATCAAATGAAGAGTGTGGTTTCATCATTTGAAGCTGTAGCTGGAAATGGAGCAGCTAAAGTTTATTCAGCTTTAGCTTTAAAAGCTATGTCAAGACATTTTAGATGTTTGAAAGATGGAATATTGGAACAAATTCAAATAACAAGAAAAGCTATGGGAGAAAAAGACCCTATTGCACCTGGAACAACTAAGGGTGAAACTCCTAGGCTTAAAATTCTAGATAGAGTTTTAAGACAACAAAGAGCATTTCAACAAATTAACATGATGGAAACTCATCCTTGGAGACCTCAACGCGGTCTTCCTGAACGATCTGTTTCAATTCTTCGAGCTTGGCTTTTTGAACACTTTCTACATCCGTACCCAAGCGACGTTGATAAACATATTTTGGCCCGCCAAACCGGTCTCTCAAGAAGCCAGGTATCAAATTGGTTTATTAATGCAAGGGTGAGGCTATGGAAGCCAATGGTGGAAGAAATGTATCTAGAAGAAGAGAAAGAGCAACAAAGAAACACAACAACCTCGGAGGGAGTAGGAGGAGGAAACAACATTAATACTCATGAAGAGGAAAATCTTAATGTACTTCAAAACCAATCTTCAACACAACTTCAAGAAGACCAAAAGCCACGACTTGTTCGAATCGATTCCGAGTGTGTTTCATCCATCATTAACAACAATCATGATCATAACAAAAATGAGGCTAATAAGAATTTGAATCATCATCATCACCAATTAGCCGTAGATGCATTTGGATCGGTTGATATCGATTTTTCATCTTATAATACACATCATTCTTCTGATCACATGGTTGCTGCTTACACAAGTAATGAGGGTTTCCACCCCGGTGGTGGTGGTGGCGGAGTTTCGTTGACGTTAGGGTTACAACAACATGGTGGAAATGGAGTGAGTTTGGCTTTTCCACCAACAACTCAAAGTTCAATGTTCTATTCAAGAGAACAAATTGATGAACCGGTTCAATACTCTCTTTTGGATGGTGAAGGAACAAATATTATGCCATATAGGAATCTCATGGGGACACAATTGCTACATGACTTGGCATGA 1926 0.3728 MAHEDDKTSSGGFCYNPTIQTQIHQGFVSDPEMFNLTTGMEMIGFSKHLQHQQQQQQQSSTDTNMWKTNFIGKLPSQHSAGGSSKTINNDSNFYHHQDFTTSSDHHHHQNLNNMIQHQHHQWQQQQQVVATDDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRHTTPHTQQDQGYHGHFLLKNSKFLLPAQQLLNEFCSLETTKPNDLVLQKQKSQKFNNNKQSWEDQDINNGGAGGGASSSSSTKQSLTSLEFVELQKRKTKLLSMLEEVDRRYKNYCNQMKSVVSSFEAVAGNGAAKVYSALALKAMSRHFRCLKDGILEQIQITRKAMGEKDPIAPGTTKGETPRLKILDRVLRQQRAFQQINMMETHPWRPQRGLPERSVSILRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEEKEQQRNTTTSEGVGGGNNINTHEEENLNVLQNQSSTQLQEDQKPRLVRIDSECVSSIINNNHDHNKNEANKNLNHHHHQLAVDAFGSVDIDFSSYNTHHSSDHMVAAYTSNEGFHPGGGGGGVSLTLGLQQHGGNGVSLAFPPTTQSSMFYSREQIDEPVQYSLLDGEGTNIMPYRNLMGTQLLHDLA* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0621 641 ProSiteProfiles 'Homeobox' domain profile. 380 443 IPR001356 GO:0003677
Tpr3g0621 641 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 7 599 - -
Tpr3g0621 641 CDD homeodomain 383 444 IPR001356 GO:0003677
Tpr3g0621 641 Gene3D - 386 448 - -
Tpr3g0621 641 Pfam Associated with HOX 191 330 IPR006563 -
Tpr3g0621 641 SUPERFAMILY Homeodomain-like 384 449 IPR009057 -
Tpr3g0621 641 SMART prehox3 185 332 IPR006563 -
Tpr3g0621 641 Pfam Homeobox KN domain 400 439 IPR008422 GO:0003677|GO:0006355
Tpr3g0621 641 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 599 - -
Tpr3g0621 641 SMART HOX_1 383 447 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0621 Tpr-Chr3 6084384 6088285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0621 132 641 Homeobox Transcription Factor Family AT5G41410 44.930 4.68e-131 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Tpr3g0621 POX 1.8e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0621 - - mtr:MTR_8g098815 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0621 3 6084384 6088285 Tpr3g0621 3 6084384 6088285 ECH