Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0620 ATGAGTTACTTGCACCTTATGTTGGAAGAGCATCCAGATGTAAAATCAGTATTCCTAACTGGAAAATGTACACCCCAAACAACCAACTCATGGATTTTCCTTGGATTGGGAAAAAAGGATAATGTTCTCGAGGCCTCATTATGGCGAAAAACATTTGGGGAAGACATAATCATTGCAAACATAGACTCAGGTGTTTTGCCCGAATCTAAAAGTTTTAGTGATGAAGATATGGGGCCGATCCCAACTAGATGGCGTGGAATTTGTCAAACTGGCAAAGACAATTCTGATAATTTTCATTGCAATAGGTTAGAACTGTCAAAACGGGCGGCTCTGCCATATTTCGGGCCGGTCCGGTCGGGCTTCGTTGGGCCGGGCTAA 378 0.4339 MSYLHLMLEEHPDVKSVFLTGKCTPQTTNSWIFLGLGKKDNVLEASLWRKTFGEDIIIANIDSGVLPESKSFSDEDMGPIPTRWRGICQTGKDNSDNFHCNRLELSKRAALPYFGPVRSGFVGPG* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0620 125 Gene3D Peptidase S8/S53 domain 27 113 IPR036852 GO:0004252|GO:0006508
Tpr3g0620 125 SUPERFAMILY Subtilisin-like 46 95 IPR036852 GO:0004252|GO:0006508
Tpr3g0620 125 PANTHER PEPTIDASE S8 8 107 - -
Tpr3g0620 125 PANTHER SUBTILISIN-LIKE PROTEASE 8 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0620 Tpr-Chr3 6081538 6082401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0620 4 123 Subtilisin-like Serine Gene Family AT2G04160 50.413 4.56e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0620 - - ccaj:109807044 128.257