Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0617 ATGCTCATGATCTGGAAAACTCCATTTCAGCTTCCAATACATTGCTCCAAGAACAAAGGTGAAGACCCTTTGTTCCAAATTTTAAAACCAAACATGGCCACAAAAGAGTCAAGTTCTTCGGCTTCAGCTGCAGGGGACACTAAAATCAAAAGGATTCTTACCCATGGTGGTAAATATGCACACTACAATGTGTATGGAAACTTGTTTGAGGTTTCTTCTAAGTATGTGCCTCCCATTCGCCCTATCGGTAGAGGCGCTTATGGTATCGTTTGTGCTGCTGTTAATTCTGATACGCACGAACAAGTTGCTATTAAGAAGATCGGTAATGCATTTGACAATATAATCGATGCTAAAAGGACTTTGAGAGAAATCAAGCTCCTTCGTCACATGGATCATCCAAATATCATTGGCATCAAGGATATCATACGACCCCCGAAAAAGGAGGCATTTAATGATGTATACATTGTTTATGAATTAATGGACACTGATCTCCATCATATAATTCATTCTGACCAACCTCTTTGTGAAGAACATTGTCAGTACTTCTTATATCAGCTGTTACGTGGGCTGAAATATGTGCACTCGGCTAATGTTTTGCACCGCGATCTTAAGCCAAGTAATTTACTAGTGAATGCAAACTGTGACCTTAAAATTGGTGACTTTGGTTTGGCAAGGACAACATCTGAAACCGATTTCATGACTGAGTATGTTGTCACGAGATGGTACCGAGCCCCCGAATTGCTCCTCAATTGTTCTGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAGCCCTTGTTTCCTGGCAAAGACTATGTTCATCAATTAAGGCTTATCACAGAGTTAATAGGTTCACCTGATGATGCCAGCCTTGGATTTCTCCGAAGTGACAATGCTAGAAGATATTTTAGACAGTTTCAACAATACCGGAAACAAAAATTCTCGTCCAGATTCCCAAACATGTTGCCTGAGGCACTTGATCTGTTAGAAAAAATGCTTATCTTTGATCCGAACAAACGCATTACAGTTGATGAGGCACTGTGTCATCCATATCTTTCATCACTTCACAACACCAATGAGGAGCCAGTCTGTCCTAGGCCATTCACTTTCGACTTTGATCAACCAACATGCACTGAAGAGAATATCAAGGAGCTAATCTGGAAAGAATCTGTGAAGTTCAATCCAGATCCACCTTGTCAGTAA 1233 0.4055 MLMIWKTPFQLPIHCSKNKGEDPLFQILKPNMATKESSSSASAAGDTKIKRILTHGGKYAHYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCAAVNSDTHEQVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHPNIIGIKDIIRPPKKEAFNDVYIVYELMDTDLHHIIHSDQPLCEEHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLVNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYFRQFQQYRKQKFSSRFPNMLPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHNTNEEPVCPRPFTFDFDQPTCTEENIKELIWKESVKFNPDPPCQ* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0617 410 Pfam Protein kinase domain 80 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0617 410 ProSitePatterns MAP kinase signature. 111 214 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tpr3g0617 410 Gene3D Phosphorylase Kinase; domain 1 59 399 - -
Tpr3g0617 410 CDD STKc_TEY_MAPK 69 405 - -
Tpr3g0617 410 ProSitePatterns Protein kinases ATP-binding region signature. 82 106 IPR017441 GO:0005524
Tpr3g0617 410 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 49 409 - -
Tpr3g0617 410 SMART serkin_6 76 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0617 410 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 49 409 - -
Tpr3g0617 410 SUPERFAMILY Protein kinase-like (PK-like) 79 369 IPR011009 -
Tpr3g0617 410 ProSiteProfiles Protein kinase domain profile. 76 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0617 410 Gene3D Transferase(Phosphotransferase) domain 1 160 389 - -
Tpr3g0617 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0617 Tpr-Chr3 6051934 6055658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0617 38 405 MAP Kinase Gene Family AT4G01370 80.163 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tpr3g0617 Pkinase 4.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0617 - - gmx:100785306 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0617 3 6051934 6055658 Tpr3g0617 3 6051934 6055658 ECH
Tpr2g3886 2 41601129 41603658 Tpr3g0617 3 6051934 6055658 PCT