Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0614 ATGGGGACTAAGGAGGATAGCACAACTAAACCTTCTAAATCATCTTCATCAACTCAGGAGGTACCAACAGTACCACCACCATATCCAGATTGGTCGCAGGCCTACTATAATCCCGGAGCTGCTCCGCCTCCCTATTATGCCTCAACTGTTCCTCAGCCAACCCCCCATCCGTATATGTGGGGAAGCCAGCATCCTTTAATGGCGCCATATGGGACTCCAGTCCCGTATCCTGCTATGTACCCTCCTGGAAATATCTATGCTCATCCTAGCATGGTAGTGGCTCCAAGTGCTATGCACCAAACTACAGAGTTTGAAGGGAAGGGACCAGATGGAAAGGATAAGGATTCATCTAAAAAACCGAAGGGCACTTCTGCGAATACAGGTGCTAAAGCAGGAGAGAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGATGGCTTTTCACAAAGTGGTGAAAGTGGTTCAGAGGGTTCATCAAATGGTAGTGATGAGAACCAACAGGAATCAGCGAGAAACAAGAAGGGAGGTTTTGACCTCATGCTTGTTAATGGAGCAAACGTACAGAACAATAACACTGGACCCATTTCTCAATCACCTGTTCCAGGAAATCCTGTTGTCTCGATACCTGCTACTAATCTTAATATCGGAATGGATTTATGGAATGCATCTCCTGCTAATGCTGAAGCCACCAAACTGAGACACAATCAATCTAGTGCCCCTGGAGCTGGTGAACAATGGATGCAACAAGATGATCGTGAGCTGAAAAGACAGAAGAGAAAACAGTCTAATCGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGCTACAAAAGAGGGTTGAGGCGTTGGGAGGTGAGAATCGAACTCTCAGAGAAGAGCTTCAGAAACTTTCTGAAGAATGCGAGAAGCTTACATCTGAAAACAATTCTATCAAGGAAGAGTTGGAACGATTGTGTGGGCCGGAAGTAGTTGCTAATCTTGAATGA 999 0.4635 MGTKEDSTTKPSKSSSSTQEVPTVPPPYPDWSQAYYNPGAAPPPYYASTVPQPTPHPYMWGSQHPLMAPYGTPVPYPAMYPPGNIYAHPSMVVAPSAMHQTTEFEGKGPDGKDKDSSKKPKGTSANTGAKAGESGKAGSGSGNDGFSQSGESGSEGSSNGSDENQQESARNKKGGFDLMLVNGANVQNNNTGPISQSPVPGNPVVSIPATNLNIGMDLWNASPANAEATKLRHNQSSAPGAGEQWMQQDDRELKRQKRKQSNRESARRSRLRKQAECEELQKRVEALGGENRTLREELQKLSEECEKLTSENNSIKEELERLCGPEVVANLE* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0614 332 Coils Coil 263 318 - -
Tpr3g0614 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 315 IPR004827 GO:0003700|GO:0006355
Tpr3g0614 332 MobiDBLite consensus disorder prediction 105 120 - -
Tpr3g0614 332 MobiDBLite consensus disorder prediction 183 202 - -
Tpr3g0614 332 Gene3D - 253 307 - -
Tpr3g0614 332 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 332 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tpr3g0614 332 MobiDBLite consensus disorder prediction 101 175 - -
Tpr3g0614 332 Pfam G-box binding protein MFMR 1 91 IPR012900 -
Tpr3g0614 332 PANTHER G-BOX-BINDING FACTOR 1 1 332 - -
Tpr3g0614 332 CDD bZIP_plant_GBF1 255 305 IPR045314 GO:0003700|GO:0006355
Tpr3g0614 332 SMART brlzneu 250 314 IPR004827 GO:0003700|GO:0006355
Tpr3g0614 332 SUPERFAMILY Leucine zipper domain 253 309 IPR046347 GO:0003700|GO:0006355
Tpr3g0614 332 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g0614 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Tpr3g0614 332 MobiDBLite consensus disorder prediction 140 165 - -
Tpr3g0614 332 Pfam bZIP transcription factor 251 312 IPR004827 GO:0003700|GO:0006355
Tpr3g0614 332 MobiDBLite consensus disorder prediction 1 66 - -
Tpr3g0614 332 MobiDBLite consensus disorder prediction 229 275 - -
Tpr3g0614 332 MobiDBLite consensus disorder prediction 229 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0614 Tpr-Chr3 6017518 6022884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0614 1 332 bZIP Transcription Factor Family AT4G36730 52.226 1.56e-99 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr3g0614 MFMR 1.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0614 K09060 - gmx:778191 473.396